| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1636 |
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| Symbol | |
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| ID | 6183690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1436849 |
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| End bp | 1437742 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672154 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001798324 |
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| Protein GI | 171464211 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.156009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.433074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACT CTAAAAAAAG CGCAACAGTG GTTATGCCAC GTTGGCGTCA ATATTGGGTT
TTAACTAAAC CCAGGGTGAC TCAGCTCGCA GTATTTTGTG CGGTGATCGG CATGTTCTTG
GCAACACCCG GTATGGTGCC TTACCCCGTT CTTTTTGGCG GCATTGTAGG TATCTGGCTT
TTAGCTGGGG CGGCATTTGC AGTGAATTGT TTAATTGAGC AGGCTGTTGA TGCCAAGATG
AAGCGCACCT CTTGGCGCCC ATCTGCTACT GGTGAAGTAA CGCCGCTTCA CATCATTATT
TTTTCTATCA TTTTGGGATC GCTCGGAATG ATTATTTTGT GGAACTTTTG TAACCCATTA
ACCATGTGGC TAACGCTTGC GACTTTCGTT GGATATGCGG TGATCTACAC CTGGTTGCTG
AAGCCTGCTA CACCACAAAA TATTGTGATT GGCGGCTTAT CAGGCGCAAT GCCGCCAGCA
CTAGGGTGGG CAGCGGTAAC TAATACCCTC TCAGCAGAAG CATGGCACTT AGTTCTGATC
ATCTTTGTAT GGACGCCCCC ACATTTCTGG GCTTTAGCTT TGTATCGCCG TGATGACTAT
GTGCAGTCCG GTTTGCCTAT GCTGCCGGTC ACCCATGGTG AGCGCTTCAC ACTACTGAAT
ATCGTGCTCT ATACCCTCAT CTTGATTGCA GCTACGATGT TGCCTTATAT CTATGGCATG
AGCGGTATGG TGTATTTGAT ATCCGCCATC ATTTTGGGAT TGTTGTTCTT GGCTTATGTA
GTTGCGCTAT TTATTTCTTA TAGCGATGCT TTGGCTAAGA AAACATTTCG CTTTTCAATC
ACCTATTTAT CGCTGCTCTT TGCAGCGCTC TTAGTAGATC ACTATTTTCT CTGA
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| Protein sequence | MSDSKKSATV VMPRWRQYWV LTKPRVTQLA VFCAVIGMFL ATPGMVPYPV LFGGIVGIWL
LAGAAFAVNC LIEQAVDAKM KRTSWRPSAT GEVTPLHIII FSIILGSLGM IILWNFCNPL
TMWLTLATFV GYAVIYTWLL KPATPQNIVI GGLSGAMPPA LGWAAVTNTL SAEAWHLVLI
IFVWTPPHFW ALALYRRDDY VQSGLPMLPV THGERFTLLN IVLYTLILIA ATMLPYIYGM
SGMVYLISAI ILGLLFLAYV VALFISYSDA LAKKTFRFSI TYLSLLFAAL LVDHYFL
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