| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1635 |
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| Symbol | |
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| ID | 6183825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1436257 |
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| End bp | 1436841 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672153 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001798323 |
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| Protein GI | 171464210 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.132888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.682458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTGC TACGCATTTG CTTTTTAGCC ATTCTTTGTT TTGTATTGAC TGCCTGCAGC
CCAAAGCCAA AGTTTAAAAA TATTGATATC ACTGGTAGCA CCGCCTTTGG CAAAGACTTT
AGCTTGCTTG ATTCTGATGA TAAGGTCAGA ACCCTGACAG ACTTTAAGGG CAAAGTAGTG
GTGATGTTCT TTGGTTATAC CCAGTGCCCT GATATCTGCC CAACCACTTT GACAGAAATG
CAGCAAGTAA TGGCACTTCT TGGGCCTCAG TCAGATAAGG TTCAGGTGCT TTTTGTGACG
GTAGATCCTG AGCGGGATAC TGCAGAAATT CTGAAGCAGT ATGTTCCAGC ATTTGATCCC
CGTTTCTTGG GTTTGCGTCC CGCAGATGAG GCTGGTTTAG AAAAGGTGAC TAAAGACTTC
AAGATCTATT ACAAGAAAGT GCCAGGTACA AAGCCAGGTT CTTACACCAT GGATCACACA
GCAGGAAGTT ATGCATTTGA TCCTGAAGGT CGCTTACGCT TGTATGTCAA ACATGCTCAA
GGTCCAGAGA CCTTGGCGCA TGATTTGAAA GAATTATTGA AGTAA
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| Protein sequence | MNLLRICFLA ILCFVLTACS PKPKFKNIDI TGSTAFGKDF SLLDSDDKVR TLTDFKGKVV
VMFFGYTQCP DICPTTLTEM QQVMALLGPQ SDKVQVLFVT VDPERDTAEI LKQYVPAFDP
RFLGLRPADE AGLEKVTKDF KIYYKKVPGT KPGSYTMDHT AGSYAFDPEG RLRLYVKHAQ
GPETLAHDLK ELLK
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