| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1633 |
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| Symbol | |
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| ID | 6183372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1434310 |
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| End bp | 1435200 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672151 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001798321 |
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| Protein GI | 171464208 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.355687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCT TACGTAAAAC CCTAGGATCC CTTTTCAAAT CAACCAAGAT TGATCAATCT
TGGTTTGATA CTCTGGAAGA ATCGCTAATA CAAAGTGATG TGGGCCTTCC AACGACCGAA
CAGCTCATCA GCAAACTACG TAAAGCAGCA AAATCGGAGA AGGCCTCGAG CCCAGAAGCT
TTACAAGCAC TCCTCATTCA AGAAGTCAGT TCACTACTCA CTACTATTGA ACCATCACCA
AACCCACTAT TTACCAAAGA CAAGCCTAAC ACCCCAGAGG TATGGTTAGT TGTAGGGGTA
AATGGCGCTG GCAAGACTAC AACCATCGGC AAACTCTGCC GACTCTTCCA ATCCCAAGGT
AAGTCGGTTC TCTTGGCTGC TGGTGATACG TTTAGAGCCG CTGCCCGAAA CCAACTTCAG
GAATGGGGTG GGCGCAATCA AGTTGATGTC ATTACTCAAG AAGGTGGTGA CGCTGCTGCT
GTTGCGCATG ATGCAATCCA TGCGGCGATC TCCCGTAAGA ACGATATTTT GATCATTGAC
ACTGCAGGTC GTCTAGCAAC TCAAGATCAT TTAATGGAGG AACTTAAAAA AGTGAAGCGC
GTCATTGACA AAGCGCTACC GGGAGCACCT CACCACACGC TACTCGTTTT GGATGGCAAC
ACAGGACAGA ACGGATTAAG CCAAGTAAAA GCCTTTCATG CTGCCCTAGG CCTTACTGGA
ATCATTGTTA CCAAGCTCGA TGGCACCGCT AAAGGCGGCG TTATCTGCGC CCTTGCCCAC
ACCCTACAAG AAGGCCCAAA ACCCGCCGTT TTAGCCCTAG GCAAGGGTGA GGGAATTGAA
GATTTAGCCC CCTTTACGGC AGGGCAATAT TCCTTAGAAT TATTCAATTA A
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| Protein sequence | MFGLRKTLGS LFKSTKIDQS WFDTLEESLI QSDVGLPTTE QLISKLRKAA KSEKASSPEA
LQALLIQEVS SLLTTIEPSP NPLFTKDKPN TPEVWLVVGV NGAGKTTTIG KLCRLFQSQG
KSVLLAAGDT FRAAARNQLQ EWGGRNQVDV ITQEGGDAAA VAHDAIHAAI SRKNDILIID
TAGRLATQDH LMEELKKVKR VIDKALPGAP HHTLLVLDGN TGQNGLSQVK AFHAALGLTG
IIVTKLDGTA KGGVICALAH TLQEGPKPAV LALGKGEGIE DLAPFTAGQY SLELFN
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