| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1627 |
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| Symbol | |
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| ID | 6183801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1429522 |
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| End bp | 1430112 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672145 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001798315 |
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| Protein GI | 171464202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.660591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAT TAATTGTTGG CCTAGGCAAC CCTGGAGAGG AGCACGAGGA GGATCGGCAC
AATGCTGGTT TCTGGTTTGT CGACGCCTTG GCCAAACAGC TGGGAGTTCG CTTTGAATCG
GAGAAGCGCT TTCACGGAAA AGTGGCGAAA GCAAAATGGG AGGGTGAAGA TTTATTCCTA
CTTAAGCCCA GCACTTACAT GAACTTGAGC GGCCAATCGG TTGGGGCACT CTGTCGCTTT
CATAAAATTA TGCCCGCAGA TATCTTGGTG GTTCAAGATG AACTTGATAT CAAACCAGGC
TCTGCGCGCC TCAAATTAGG CGGAGGCACG GGTGGTCACA ATGGCTTAAA AGATATTCAG
GCGCATTTAA GTACCCCAAA TTACTGGCGC TTACGCTTAG GCATTGGCCA CCCTAGAGAT
ATCGCGGGTG ATGGACGTCC TATGGATGTT GCGGACTATG TACTTCGCAG ACCCCAATTG
ACAGAGCAAA AACTCATCAA TACCAGCATT GAAAATGGGC TAAATATTTT GTCGCTCTTT
TTAAAAGGCG ATACTCAAAC CGCCATGATG GAGCTGCACT CCAAAGGTTA A
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| Protein sequence | MTKLIVGLGN PGEEHEEDRH NAGFWFVDAL AKQLGVRFES EKRFHGKVAK AKWEGEDLFL
LKPSTYMNLS GQSVGALCRF HKIMPADILV VQDELDIKPG SARLKLGGGT GGHNGLKDIQ
AHLSTPNYWR LRLGIGHPRD IAGDGRPMDV ADYVLRRPQL TEQKLINTSI ENGLNILSLF
LKGDTQTAMM ELHSKG
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