| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1621 |
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| Symbol | |
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| ID | 6183736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1423167 |
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| End bp | 1424312 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672138 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001798309 |
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| Protein GI | 171464196 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.865832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAA CGTTGATCAA CAACTTTGCG CCAAAGTTAA TTGCCTGGCA TGGGGTCAGT
GGGCGCTCGA GCTTGCCTTG GCAAGGCAAT CGAGATCCTT ACGCAGTCTG GGTCTCCGAA
ATTATGTTGC AACAAACACA AGTAACTACC GTACTTGAGC GCTACCCACG TTTTATGAAA
CGTTTTCCTA CGGTTAAAAA ATTAGCCGCA GCTGATATTG ATGAAGTATT GGCGGAGTGG
GCTGGCTTGG GTTATTACTC TCGCGCTAGA AATCTGCATG CCTGTGCAAA ACAAGTGGTG
ACAGAATTTG GTGGCAAGTT TCCGAGTGAC CCGGTTTTGC TTGAGCAATT AAAAGGTATT
GGGCGCTCTA CTGCTGGTGC AATTGCCGCC TTTGCATTTC ATGAGCGAGC ACCAATTTTG
GATGTCAATG TTAAGCGTAT CTTGGCGCGT TTATTTGTAA TTGAAGGCGC CATTCAAGAT
AAAGTAGTTA ATGATCAACT TTGGGGGTTG GCAGCAGATT TATTGCCAAG TAATTCTGCT
GATATGTCGG TCTATACTCA GGCTCTGATG GATTTTGGAG CAACCTGGTG CACTTCACGT
AAGCCGGTGT GTTTGGGTTC TGAAAAAAAG TGTCCATTCG AGAAAGACTG TCAGGCAAAT
TTGAGCGATC AAGTCCTTCT ACTTCCGCAA AAAACGAAAA AGACCAAGTC GCCTGAATTC
AACTGCAATA TGTTGTTGAT GCGTAGCGGC AATTCTGTTC TCTTGCAAAA GCGCCCCAAT
AAGGCGATTT GGGGAGGTTT GTGGTCCTTG CCAGAATCAG TTTGGGTGCC CAAGGCGCGC
GGTCCAGAAG TCGCTGATCT CAGTCCGGAA GACTTGTTTA CAGCCACTTT GCCAGAAGAA
AAGATTGCAT CACTGATTAA GGCATGTAAG TCGACAATAA GGGCCAATCA AATTAAGCAC
ATCTTTACCC ATAGACGTTT ATGGATGCAA ATTTGGCAGA CAAATTCCGT AAAAGAGTTG
TCATTTTTAA ATCCAAATTT AAAGTGGGTG CCCTTAAGTC AGGTGGGGCG CTACGGCCTG
CCGCAGCCGA TTAAGATTTT GCTACAGGAA TTGAGTCTAG TTCGCGATGA CGATCTAAAA
AATTAA
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| Protein sequence | MSKTLINNFA PKLIAWHGVS GRSSLPWQGN RDPYAVWVSE IMLQQTQVTT VLERYPRFMK
RFPTVKKLAA ADIDEVLAEW AGLGYYSRAR NLHACAKQVV TEFGGKFPSD PVLLEQLKGI
GRSTAGAIAA FAFHERAPIL DVNVKRILAR LFVIEGAIQD KVVNDQLWGL AADLLPSNSA
DMSVYTQALM DFGATWCTSR KPVCLGSEKK CPFEKDCQAN LSDQVLLLPQ KTKKTKSPEF
NCNMLLMRSG NSVLLQKRPN KAIWGGLWSL PESVWVPKAR GPEVADLSPE DLFTATLPEE
KIASLIKACK STIRANQIKH IFTHRRLWMQ IWQTNSVKEL SFLNPNLKWV PLSQVGRYGL
PQPIKILLQE LSLVRDDDLK N
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