| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1615 |
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| Symbol | |
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| ID | 6183847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1419001 |
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| End bp | 1419573 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672132 |
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| Product | OstA family protein |
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| Protein accession | YP_001798303 |
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| Protein GI | 171464190 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTTC TCAATTGCTG GCAACCTCGC GCTGTCCTAC TGAGCTTTTT AGCGTTGGGA
TTTGCAATTA CAAATCCAGT GCTGGCCGAA AAAGCAGACC AAGATAAGCC CGTCATTCTT
CAAGCGGAAA AAGTTTCCGT TAACGACGTT AAACAAATTT ACGATCTCAA TGGCCAAGTG
CTGCTTATCA AAGGCAGCAT CATTGTGACC GGTGAAAATG GTCACATAGC AGTGGATCCC
CAGGGTTATG AGTTTGTCGA TGTCATAGGC ACCCCCGAAG AGGTTGCGAG CTTTAGGCAG
CGACGCGAAG GTCCGGCCGA TGAATTTATG CAAGGACGTG GCGCCCAGGT GACCTATGAT
GCTAAATCAG AGTTTCTAAT ACTCACTGGT GACGCCAGTC TGAAGCGCTT ACTCAATATG
CAAATGCTGG ATCAATTAAA AGGCTGGAAA ATTGAGTACG ATGATGTAAA GCAGTACTAT
CAAGTCATAC CCCCCAAAGA CGCAAAACCG GAAGACCTGC CATTAGCAAG GGCCATTCTT
TCACCAAGAC GAAAAGCAAT ATTAGAGAAA TGA
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| Protein sequence | MQFLNCWQPR AVLLSFLALG FAITNPVLAE KADQDKPVIL QAEKVSVNDV KQIYDLNGQV
LLIKGSIIVT GENGHIAVDP QGYEFVDVIG TPEEVASFRQ RREGPADEFM QGRGAQVTYD
AKSEFLILTG DASLKRLLNM QMLDQLKGWK IEYDDVKQYY QVIPPKDAKP EDLPLARAIL
SPRRKAILEK
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