| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1613 |
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| Symbol | |
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| ID | 6183255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1417781 |
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| End bp | 1418356 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672130 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| Protein accession | YP_001798301 |
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| Protein GI | 171464188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGCG CCTTTTTTAA TACGCACAAT ACCAATCCAC TAGCTCAATA CCCACAGGCC
TGGGAGCGCG CTGGCAAAGT AAAGCTCTTG GTTTTAGATG TGGATGGCGT ATTAACTAAT
GGACAGGTTT GGATTGGTGC CGACGGCAAA GAATCTTTGA AGGCCTTTGA TATTCAAGAC
GGATTAGGCA TTAAGTTATT AGAACAATGC GGCATTCTGA CTGCCATTAT CACTGGCAGA
AATTCCAAAA TGGTTTTAGC ACGCTGTGAA GAACTCGGTA TCAAACATGT ACACATGGGC
GTTGAGAACA AAGCCACTGC ATTAGCGGAA GTTGTGAAAT CCCTAGGGCT GACTTCAGCA
GACTGCGCTG TTATGGGTGA TGACTGGCCA GACATGCAAA TGATGAAACA TGCTGGCTTC
AGAATTTGCC CAGCACAAGG TCACGAAGCC GTTAAAGAAT TTGCTCATTT AGTTACCACC
CATAGCGGGG GCAATAGCGC CGTTCGTGAA GTATGCGATC TGATTCTCAA GGCGCAGAAT
CGCTATGAAA AATTGCTCTC CAAGGCTTGT AGCTAA
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| Protein sequence | MSSAFFNTHN TNPLAQYPQA WERAGKVKLL VLDVDGVLTN GQVWIGADGK ESLKAFDIQD
GLGIKLLEQC GILTAIITGR NSKMVLARCE ELGIKHVHMG VENKATALAE VVKSLGLTSA
DCAVMGDDWP DMQMMKHAGF RICPAQGHEA VKEFAHLVTT HSGGNSAVRE VCDLILKAQN
RYEKLLSKAC S
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