| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1611 |
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| Symbol | |
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| ID | 6183194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1414770 |
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| End bp | 1416752 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672128 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001798299 |
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| Protein GI | 171464186 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCAG TCCTTCAATT AACCCTCATT CTCCTGGCCT CGGGTGTGGC CGGAGTGGTT
ATTTTCCGCT ATTTTGGTCT GCCCCCTATT TTGGGCTATT TGGCCATTGG CGTACTGATT
GGCCCCCATG CCTTTGGTTT GGCAAATGAC TCAGCCACAG TTAAGTATTT AGCGGAATTC
GGGGTAGTTT TCTTGATGTT CTCGATTGGC CTTGAATTTA ACCTTCATAA ATTGCGGGCC
ATGCGATCGA TCGTATTTGG TCTTGGCGGT AGCCAAGTCA TTTTGACTAT GCTTCTGGCG
ATTCCTGCAA GCTTATTAAT GAATTGGATT TATCCAATTT CTTGGCATGC GGCAATTGCT
TTGGGTGGGG CATTGGCAAT GTCGTCTACA GCGATTGTGA CTAAGTTGAT TTCAGATCGT
GCGGAATTAG AAACTGAGCA TGGCCGCAAT GTTGTAGGTA TTTTGCTGTT CCAGGATCTG
GCAGTTGTAT TCCTTTTGAT CTTGTTGCCA TCACTGGGCA AAAACCCCTC GGACTTATTT
GTTGCGCTTA CTGCAGCTTC CATCAAGATC ACCGTTGCAT TAGTGTTGAT CTTCTTCATT
GGTCAGAGCT TGATGAGCCA TTGGTTTAGA TTGGTTGCCA AGCTGCGCTC ACAGGAATTA
TTCATGCTGA ACCTTTTGTT AATTGTGCTC GGCATGGCAG GATTAACAGA GCACTTTGGC
TTGTCGCTGG CGTTGGGTGC CTTCTTGGCG GGCATGTTAA TTTCTGAAAC ACCCTATCGC
CATCAGGTGG AAGAAGACGT CAAACCTTTC CGTGATGTTC TGCTTGGGCT CTTCTTTATT
ACGATTGGCA TGCTGCTCGA TTTCAATGTT ATTCGCGAGC AGTGGGTCCT CGTGCTGGTT
TTATTGATTG GACCGCTGAT CTTTAAGTTT GGTCTCATCA CCTTGTTATC CAGGGCCTTT
GGTTCTAGCC CTGGAATCTC GATTAGAACG GGCCTGTGCC TGGCTCAGGC TGGTGAATTT
GGCTTTGTGT TGCTCAATCA AATTGACGGT TTAGATCTGA TTGATCCTAC TTTGAGTCAA
GCTGTATTAG CAGCTATGTT GATCTCCATG TTCTGCGCAC CATTTCTCAT TGAATACAGT
GATCGCATTG CCATGCGTTT CTCTAGTAAT GAATGGCTGC TTCAATCTCT TGCATTGACA
AGAGTCGCCT CTAAAAGCGT TCGCAATGAA AATCATGTGG TCATTTGTGG TTTTGGCCGT
TCCGGTCAAA GTTTGGCGCG CATGCTTGAT CAAGAAAAAA TTCCCTACAT TGCATTGGAT
TTAGATCCCG ATCGCGTCAA AGAGGCTGCG GCTGCTGGGG ACAATGTGGT CTACGGAGAT
GCAAGCCGTG AAAATTATTT AGTTGCTGCT GGGCTTTCTA GAGCAAAGGC GGTGGTGATT
ACCTATGCTG ATACTGCTGC AAGTATGCGG ATCCTCCGTC AAGTTGAGCA TTTACGCCCT
GGTATGACGG TATTGGTGCG CACCCGAGAT GATTCTGACA TTGCTAAGTT GCAAGCTGCT
GGCGCTACCG AAGTCGTGCC TGAATTAATC GAAGGTAGTT TGATGATTGC ATCCCATGTC
TTGCTGATTA TGGGTGTTCC TATGCGAAAA GTAGTGCGAC GCATCACCAC AACACGTGAA
GAGCGTTATA GCTTGTTAAG AGGTTATTTC CGGGGTTCTG CAGATGACGA TTTTGGTTCG
AATGAGTCTT GGCGTTTGCA TACCATTACG TTGTTGCCAA ACTCCCAGGC AATTGGGAAA
ACGCTTGGTG AGCTTGACCT AGATAAAGAG GGTGTCAACG TTCAGGCAGT TCGTCGCAAG
GGTAGAAACG CCGATTATGT GAAGTTAGAC CCTAATCCAG ATCTACGGCT AGAGGCCAAT
GATATTTTGG TGATCTCGGG GAACTCAGAG GCAACTGATT TGGCTGAAGC CAAGTTACTC
TGA
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| Protein sequence | MPSVLQLTLI LLASGVAGVV IFRYFGLPPI LGYLAIGVLI GPHAFGLAND SATVKYLAEF
GVVFLMFSIG LEFNLHKLRA MRSIVFGLGG SQVILTMLLA IPASLLMNWI YPISWHAAIA
LGGALAMSST AIVTKLISDR AELETEHGRN VVGILLFQDL AVVFLLILLP SLGKNPSDLF
VALTAASIKI TVALVLIFFI GQSLMSHWFR LVAKLRSQEL FMLNLLLIVL GMAGLTEHFG
LSLALGAFLA GMLISETPYR HQVEEDVKPF RDVLLGLFFI TIGMLLDFNV IREQWVLVLV
LLIGPLIFKF GLITLLSRAF GSSPGISIRT GLCLAQAGEF GFVLLNQIDG LDLIDPTLSQ
AVLAAMLISM FCAPFLIEYS DRIAMRFSSN EWLLQSLALT RVASKSVRNE NHVVICGFGR
SGQSLARMLD QEKIPYIALD LDPDRVKEAA AAGDNVVYGD ASRENYLVAA GLSRAKAVVI
TYADTAASMR ILRQVEHLRP GMTVLVRTRD DSDIAKLQAA GATEVVPELI EGSLMIASHV
LLIMGVPMRK VVRRITTTRE ERYSLLRGYF RGSADDDFGS NESWRLHTIT LLPNSQAIGK
TLGELDLDKE GVNVQAVRRK GRNADYVKLD PNPDLRLEAN DILVISGNSE ATDLAEAKLL
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