Gene Pnec_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1606 
Symbol 
ID6183725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1408214 
End bp1409122 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID641672124 
Product5'-nucleotidase 
Protein accessionYP_001798295 
Protein GI171464182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.521247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATACA CACTCACCGG AAAACTCGTC GTTGCAATCT CATCGCGCGC CTTGTTTGAT 
TTCGAAGAAG AAAACCGCAT CTTCGAATCC ACCGATGACA GTGCTTACAT GAAATTACAG 
CTTGAGCGTC TGAGTGAAGC AGCCCAAAAG GGGGTGGCTT TTCCGCTGGT TAAGAAACTT 
CTCGCTTTTA ATGAGGAAGA TGAGCAGCGT GTTGAGGTGG TGATCCTTTC CCGAAATGAT 
CCTGTCAGTG GTTTACGCGT CTTCCGTTCT GCTGAACATC ACGGCTTGCA TTTAGAACGC 
GGCGTATTCA CCAGAGGTCG CCCTCCGTAC CATTACTTAC GCTCGTTACA CGCCAACCTC 
TTCTTATCCG CCAATGAAGA TGATGTGAGG GCAACTATTG ACGCAGGTTT TCCAGCAGCA 
CGCGTCTACC CAGAGTCCAG CAAAACTGCT GAGTCTCACC CAAATGAAAT TCGGATTGCA 
TTTGACGGAG ACGCAGTGCT CTTTTCAGAT GAAGCAGAAC AAGTTTTCCA AAAAAAAGGG 
TTTGAAGCTT TTGTTGATCA CGAGAGCAAG AAGGTCGATA TTCCCTTGCC TCCCGGTCCT 
TTCAAACCTC TACTGGAAGC ACTCCACAGA CTGCAGCGCT CCACTGGTGA AAATGGTATG 
CGTATCCGTA CTGCGTTAGT AACGGCACGC TCTGCTCCCG CGCATGAACG CGCCATTCGC 
ACCCTGATGG CATGGGGTAT TGATGTTGAT GAGGCAATGT TCTTGGGCGG TCTATCGAAG 
AGCGAATTCC TACGAGAATT TGAACCAGAC TTCTTCTTTG ATGATCAAAC TGGCCACTGT 
CAATCGGCCG CTTCTGTGGC ACCTACAGGT CACGTTGTCT CTGGCGTATC GAATAAGCCC 
AAAGGCTAA
 
Protein sequence
MSYTLTGKLV VAISSRALFD FEEENRIFES TDDSAYMKLQ LERLSEAAQK GVAFPLVKKL 
LAFNEEDEQR VEVVILSRND PVSGLRVFRS AEHHGLHLER GVFTRGRPPY HYLRSLHANL 
FLSANEDDVR ATIDAGFPAA RVYPESSKTA ESHPNEIRIA FDGDAVLFSD EAEQVFQKKG 
FEAFVDHESK KVDIPLPPGP FKPLLEALHR LQRSTGENGM RIRTALVTAR SAPAHERAIR 
TLMAWGIDVD EAMFLGGLSK SEFLREFEPD FFFDDQTGHC QSAASVAPTG HVVSGVSNKP 
KG