| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1605 |
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| Symbol | |
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| ID | 6182958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1406680 |
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| End bp | 1408200 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672123 |
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| Product | threonine dehydratase, biosynthetic |
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| Protein accession | YP_001798294 |
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| Protein GI | 171464181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.677814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGA ACTATTTAAA GAAAATTTTA TCGGCTCGCG TCTATGACGT AGCCAGAGAA
ACCGAACTTC AGCTCGCCCC AGAACTGACT AAACGTTTAG GTAATCAGGT TCTTCTCAAG
AGGGAGGATA ACCAACCGGT TTTCTCCTTC AAGCTGCGTG GCGCCTACAA CAAAATGACC
CATTTACCCC CTGAAGCCCT AAAACGCGGA GTTATTGCGG CCTCCGCAGG TAACCACGCC
CAGGGCGTAG CATTATCAGC CTCCAAAATG AAGTGCAAGG CCGTCATCGT GATGCCGGTA
ACCACCCCAA GTGTAAAAAT TGACGCAGTT AAGGCTCGGG GTGGCTCCTG GGTAGAAATC
ATCCTTCATG GCGAGTCTTA TAGCGACGCC TTCAAGCATT CTGAGGTTTT AGGCAAAAAA
TGGGGTCTAA CTTTTGTGCA TCCTTTTGAT GATCCAGATG TCATTGCGGG ACAAGGAACA
ATCGCCCATG AAATCTTTAC TCAATATGAA AAACCGATCG ATGCGGTTTT TGTAGCCATT
GGCGGTGGTG GCTTGATCGC AGGCATTGGT GAGTACATCA AAGCCGTCAG CCCAAAAACA
AAAGTGATCG GCGTGCAAGC TTCTGACTCT GATGCCATGA ATCAATCGCT CAAAGCAAAC
AAGCGCGTTG AGATGAAAGA TGTCGGTTTG TTCTCAGATG GTACCGCTGT GAAGCTCGTC
GGCAAGGAAA CATTTCGCAT CTGCAAAAAA GTAGTGGATG AAATTGTGAC GGTTGATACA
GATGAAATCT GCGCGGCCAT CAACGATGTC TTCACTGACA CTCGCAGCAT TCTTGAACCC
GCTGGCGCAC TAGCAATTGC GGGAATGAAG AAGTATGTTG AGAAAAAACG CATCAAGAAG
AAAACCTTGG TGGCCGTAGC TTGCGGGGCT AATATGAACT TTAGCCGCCT GCGTTTTGTA
GCTGAACATG CAGACGTTGG TGAATTCCGT GAAGCTGTGT TTGCGGTAAC GATTCCTGAA
GAGCGTGGCT CTTTCAAACG CTTCTGTGAA TTACTTGGCA AACGCAATGT AACTGAATTT
AACTATCGCA TTGGCGATCA AAGCGAAGCA CATATTTTTG TAGGTATTAG CACGCAAAAA
GCGGGTGATA GCGAAGCGAT TGCAAAGCAT TTCCGTAAAG CAAAGTTTGC AACAATCGAT
CTAACTCATG ATGAGCTAGC GAAGTCCCAT TTACGTCACA TGGTGGGCGG ACACTCTACA
CTTGCTAAAG ATGAATTGCT CTATCGTTTT GAATTTCCAG AACGTCCAGG CGCTTTGATG
AAGTTCCTCA CCAGCATGGC GCCGAACTGG AACATCAGCT TATTCCATTA CCGTAACCAT
GGCGCCGACT ATGGTCGCAT CCTGGTTGGT CTTCAAGTTC CCAAGAATGA GCAGAAGAAA
TTCCAGGGCT TTTTGGCCGG TTTGGGCTAT CCACATTGGG ATGAAAGCAA CAATCCTGCA
TATCGTCTAT TCCTGAAATA A
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| Protein sequence | MATNYLKKIL SARVYDVARE TELQLAPELT KRLGNQVLLK REDNQPVFSF KLRGAYNKMT
HLPPEALKRG VIAASAGNHA QGVALSASKM KCKAVIVMPV TTPSVKIDAV KARGGSWVEI
ILHGESYSDA FKHSEVLGKK WGLTFVHPFD DPDVIAGQGT IAHEIFTQYE KPIDAVFVAI
GGGGLIAGIG EYIKAVSPKT KVIGVQASDS DAMNQSLKAN KRVEMKDVGL FSDGTAVKLV
GKETFRICKK VVDEIVTVDT DEICAAINDV FTDTRSILEP AGALAIAGMK KYVEKKRIKK
KTLVAVACGA NMNFSRLRFV AEHADVGEFR EAVFAVTIPE ERGSFKRFCE LLGKRNVTEF
NYRIGDQSEA HIFVGISTQK AGDSEAIAKH FRKAKFATID LTHDELAKSH LRHMVGGHST
LAKDELLYRF EFPERPGALM KFLTSMAPNW NISLFHYRNH GADYGRILVG LQVPKNEQKK
FQGFLAGLGY PHWDESNNPA YRLFLK
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