Gene Pnec_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1602 
Symbol 
ID6184519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1401565 
End bp1402308 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content44% 
IMG OID641672120 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_001798291 
Protein GI171464178 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAA CGCACTTTGG TTATCAAAGC GTTGATGAGG CTGAAAAAGC CGGCAAGGTT 
GCTGAAGTAT TTCATTCAGT AGCCAGTAAA TATGATGTGA TGAATGACCT TATGTCATTT
GGCTTACATC GTGTTTGGAA AAAAATTACG ATTGCTAGGG CAAATGTGCG CCCTGGTCAA
AAGGTCTTAG ATATTGCTGG TGGTACTGGC GACTTGGCTG CTGCTTTTGC AAAAGCAGCA
GACTGGGGTC GCAGTCCTGA TGCTCAAGTT TGGTTAAGCG ACATAAATGC CTCTATGTTG
GGTGTTGGTC GTGATCGACT TTTGGATCGT GGTATGGTTT TGCCCTGCGT ACAGTTTGAT
GCAGAAAAGA TTCCATTCCC CAATAATCAT TTTGATGTGG TGACAGTTGC TTTCGGTTTA
CGCAATATGA CTCATAAGGA AGTTGCTTTG GGTGAAATGC GTCGCGTGAT TAAGCTCGGT
GGCCGAGTAT TGGTATTGGA GTTTTCAAAG CCCGATGCTT TTTTGCAGTC GGTATATGAC
ACTTATTCTT TTAAGGTTCT GCCTTGGTTG GGCGAGAAGA TTGCACAAGA TTCCGAGAGT
TATCGCTACT TAGCAGAATC TATTCGCATG CATCCCGATG CTCAAACCCT CAAAGAAATG
ATGTTAGGAG TAGGTTTTGA TGAGGTGGAA ACCCATAGGA TGACTGGGGG TATCGTTGCC
TTACATATTG GTATTAAATA CTGA
 
Protein sequence
MSKTHFGYQS VDEAEKAGKV AEVFHSVASK YDVMNDLMSF GLHRVWKKIT IARANVRPGQ 
KVLDIAGGTG DLAAAFAKAA DWGRSPDAQV WLSDINASML GVGRDRLLDR GMVLPCVQFD
AEKIPFPNNH FDVVTVAFGL RNMTHKEVAL GEMRRVIKLG GRVLVLEFSK PDAFLQSVYD
TYSFKVLPWL GEKIAQDSES YRYLAESIRM HPDAQTLKEM MLGVGFDEVE THRMTGGIVA
LHIGIKY