| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1598 |
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| Symbol | |
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| ID | 6183652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1397613 |
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| End bp | 1398266 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641672116 |
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| Product | protein of unknown function DUF502 |
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| Protein accession | YP_001798287 |
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| Protein GI | 171464174 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2928] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ACTTTATCGC TGGCATTCTC GTATGGGCAC CATTGTCGAT CACCATCTGG
GTGATTGCAT GGGGCTTAGG CCTGCTCGAC GGTGTATTTG GTTCTGTAAT GCACGCCATC
ATCGCTATTT TCCCGCGTCA ATTTGCTGGA GATTTGCAGC ATTTCCGTGA GTTGCCTGGC
GTTGGTATTT TGATTGTTAT CGCCGTGATT ATGGCCACTG GTTTATTGGC AATTAGTTTT
GCTGGACAGT GGTGGATACG GATGTGGAAT AAGCAGATCA ATCGCATTCC TATCGTGCGT
TCCATTTATT CAAGCGTTCA GCAAGTTTCA TCCACATTAT TTTCGGGCAG TGGCCAAGCG
TTTAGTAAGG CGTTATTAAT TTGTTATCCC CATGCTGATT CATGGGTGAT TGCATTTCAA
ACCGGCACAC CTGCAAAAGA AGTAACTTCT AAATTAGGCG AAGACTACGT CAATGTATTC
TTGCCAACAA CCCCAAATCC CACCTCTGGT TTTTTCATGA TCGTGCCACG TGCCCAAACG
ATTGAATTAG AGATGAGTGT GGAAGAGGCT TTGAAACATA TTGTTTCAAT GGGCTCTGTT
CCTCCCAATA GTTCTAGTGG TTTAACTGCT TCCCAGTTAC CTCACCATTT TTGA
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| Protein sequence | MKKYFIAGIL VWAPLSITIW VIAWGLGLLD GVFGSVMHAI IAIFPRQFAG DLQHFRELPG
VGILIVIAVI MATGLLAISF AGQWWIRMWN KQINRIPIVR SIYSSVQQVS STLFSGSGQA
FSKALLICYP HADSWVIAFQ TGTPAKEVTS KLGEDYVNVF LPTTPNPTSG FFMIVPRAQT
IELEMSVEEA LKHIVSMGSV PPNSSSGLTA SQLPHHF
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