| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1597 |
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| Symbol | |
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| ID | 6183290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1395794 |
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| End bp | 1397596 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672115 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001798286 |
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| Protein GI | 171464173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.566711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGC GAAGCCATAC CTGCGGTCAG GTAACCGATT CACTGATTGG TCAAGAAGTC
ACTCTCGCTG GATGGATAAA CCGCCGCCGT GACCACGGAG GCGTGATCTT TATTGACTTA
CGTGACCGCG AAGGTTTTGT GCAAGTGGTT TGCGATCCAG ATCGTCCAGA AATGTTTGCC
CTTGCTGAGC AAGTGCGTAG CGAGTTCTGT ATTCAGATCA AAGGTCTCGT GCGCGCGCGT
CCAACGGGCA CAGCAAACGT TGATCTAGTT AGCGGCAAAG TGGAAATTCT TTGTCACAGC
TTGGTGATCC TGAATGCTTC AGTAACTCCA CCATTCCAGA TTGATGATGA GAGTTTATCC
GAGACTACTC GCCTAACTCA TCGCATATTA GATTTGCGTC GTCCGCAAAT GCAAAAGAAT
TTGCGTTTGC GTTACAACGT AGCGATGGAG TGCCGTCGTT ATTTAGATGA TGCTGGCTTT
ATTGATATCG AAACACCAAT GCTCACCAAG AGCACCCCAG AAGGTGCACG CGATTATTTA
GTTCCATCCC GTGTGCATGA TGGTCAATTT TTCGCATTGC CACAGTCTCC ACAGTTGTTT
AAACAACTGT TAATGGTGGC TGGTTTTGAT CGTTACTATC AAATTACAAA ATGTTTCCGT
GATGAGGATT TGCGCGCAGA TCGTCAGCCT GAATTTACTC AAATAGACTG TGAGACTGCT
TTCTTAAGTG AGTTAGAGAT TCGCGATTTG TTTGAAAACA TGATTCGTCA TATTTTCAAG
AAGACGATTA ATGTCGAGTT GCCGAACCCA TTCCCAACAA TGCCTTACTC AGAAGGTATG
GCTCGTTTTG GCTCTGATAA ACCTGATTTG CGGGTGAATT TTGAATTTAC AGAATTGACG
GACTTGATGA AAGACGTTGA TTTCAAAGTC TTCTCAGGTG CCGCCAATCA GGTTGGTGGT
CGCGTTGTGG GCTTATGCGT TCCAGGCGGT GCTGAAATCA GCCGTAGTGA AATTGATGAC
TACACCCAGT TCGTCAGTAT CTATGGCGCC AAGGGGCTGG CTTGGATCAA GGTGAACTCT
GTGGCTGAAG GCCGCAATGG TTTGCAGTCC CCAATCGTGA AGAATTTGCA TGACGCTGCA
ATTGAAGGCA TCTTGAAGCG CACTGGTGCA AAAGATGGCG ATATTATTTT CTTTGGTGCC
GATAAAGAAA AAGTGGTGAA CGATGCAATC GGTAATCTAC GTCTGCGCAT TGGTCAATCC
GCTTGGGGTA AAGAGCATGG ACTCTTTACA GAAGGTTGGA AGCCATTGTG GGTAGTTGAC
TTCCCAATGT TTGATTACGA TGAAGGCGAA GCCCGTTGGG TTGCTTGCCA TCATCCGTTC
ACTAGCCCTA AAGATGAGCA TATGCAGTAC TTGGAAACTG ATCCAGGTAA ATGTTTAGCT
AAAGCATATG ACATGGTATT GAATGGTAGC GAAATTGGTG GTGGCTCTGT TCGTATTCAC
CAAGAAGCAG TGCAAAGCCA AGTATTCCGT GCATTGAAGA TTGATGCAGA AGAAGCTCAA
GCGAAGTTTG GTTTCTTGTT GGATGCACTC CAATATGGCG CACCCCCACA CGGCGGTATC
GCATTTGGTT TGGATCGTAT TGTGACCATG ATGACTGGTG CAGAGTCGAT TCGTGATGTT
ATTGCCTTCC CTAAGACGCA GCGTGCGCAA TGCTTGTTAA CTCAAGCTCC CAGTCCAGTA
GATGAGCGTC AGTTACGCGA GTTGCATATT CGTTTGCGTC AAGCAGCCGC ATCTGCCGCT
TAA
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| Protein sequence | MSMRSHTCGQ VTDSLIGQEV TLAGWINRRR DHGGVIFIDL RDREGFVQVV CDPDRPEMFA
LAEQVRSEFC IQIKGLVRAR PTGTANVDLV SGKVEILCHS LVILNASVTP PFQIDDESLS
ETTRLTHRIL DLRRPQMQKN LRLRYNVAME CRRYLDDAGF IDIETPMLTK STPEGARDYL
VPSRVHDGQF FALPQSPQLF KQLLMVAGFD RYYQITKCFR DEDLRADRQP EFTQIDCETA
FLSELEIRDL FENMIRHIFK KTINVELPNP FPTMPYSEGM ARFGSDKPDL RVNFEFTELT
DLMKDVDFKV FSGAANQVGG RVVGLCVPGG AEISRSEIDD YTQFVSIYGA KGLAWIKVNS
VAEGRNGLQS PIVKNLHDAA IEGILKRTGA KDGDIIFFGA DKEKVVNDAI GNLRLRIGQS
AWGKEHGLFT EGWKPLWVVD FPMFDYDEGE ARWVACHHPF TSPKDEHMQY LETDPGKCLA
KAYDMVLNGS EIGGGSVRIH QEAVQSQVFR ALKIDAEEAQ AKFGFLLDAL QYGAPPHGGI
AFGLDRIVTM MTGAESIRDV IAFPKTQRAQ CLLTQAPSPV DERQLRELHI RLRQAAASAA
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