| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1595 |
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| Symbol | |
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| ID | 6183340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1393466 |
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| End bp | 1395289 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672113 |
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| Product | ABC transporter related |
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| Protein accession | YP_001798284 |
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| Protein GI | 171464171 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00338699 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.481245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATATT CATCGGGACA TCATCACGGC AGAGTAGATT CAAAAACACC CCAAAGAGGT
GACTGGCGCG TTATTCGAGA CCTTCTACCT TATCTTTTGG AGTATCGTTT TCGGGTCATT
ATTGCTCTCA GTTGTTTGAT TTCTGCCAAG ATTGCTAATA TCGGTATTCC GATAGTGATG
AAAGAGTTAA TTGACTCTTT AGACATCAAA GCAAGTTCCC CACAAGCAAT CCTGGTTGTG
CCTCTGGGTG TTATTGTTGC TTACGGTCTT TTGAGAATTT CCGCTTCCCT GTTTACTGAG
TTGCGCGAAG CCTTGTTTGC CAAGGTTACT CAGAATGCGG TTCGTAAAGT GGCGCTCCAG
GTATTTGAGC ATCTACATTC CTTAGCATTG AGTTTTCATC TGGCACGCCA GACTGGCGGG
GTGAGTCGAG ATATTGAGCG CGGCACACGT GGCATTCAGC CGCTGATTTC TTATTCCCTC
TATAGCATTC TGCCAACACT CATTGAGTTT TGTTTGGTAC TTAGCTACTT TGCTTACTCT
TACGACATCT GGTTTGCGGC AGTAACCTTG GCTGCCTTGG TTCTCTATAT TGTTTTCACT
ATTGTTGTGA CAGAGTGGCG CACCCATTAC CGTCGCACAA TGAACGATAT GGATTCAAAG
GCCAATCAAA AGGCTGTTGA TTCTTTATTG AATCTTGAAA CCGTGAAGTA TTTTGGTAAC
GAAGCTTTTG AAGCCGGTCG TTACGATGAA AATTTACTGC GATATCAAGC GGCAGCAGTC
AAGTCACAAA AGACGCTAGC TTTTCTGAAT CTTGGGCAAC AAATTATTAT TGCAGTAGGT
TTAATGCTAA TTTTATGGCG CGCGACAGTG GGGGTGGTGA ATGGCACCAT GACCTTGGGT
GATCTAGTGC TTGTAAACAC CTTGATGATT CAGCTCTACA TTCCGCTAAA TTTTTTGGGT
GTGATCTATC GTGAGATTAA GCAATCATTG ACGGATATGG ATCGCATGTT TTCTTTGCTC
AATACTGAAA AAGAAATTGC AGACTCGCCA GATGCAAAGC CGCTACAAAT CCAGAATCAA
AGTTATGGCC CTGATGTTCG TTTTGAGAAT GTATCTTTTC ATTATGATGC TAAGCGTGAG
ATTCTGCGTG ATGTGAGTTT TAATATTCCC GCAGGAACGA TTACTGCAGT TGTAGGCCAA
AGCGGTGCGG GTAAGAGTAC TTTGGCCAGG CTGTTATTTC GTTTCTACGA TGTTCAGTCT
GGAGAGATTC TGATTGATAC GCAAAATATT CAGGATGTAA CGCAGGCTAG TTTGCGTAAA
GCGATTGGCA TAGTTCCGCA AGATACCGTT TTATTCAATG ACACGATTGG ATACAACATT
GCTTATGGCG ACCCTTCCGC TAGTCTCGAT GAGGTGCGTG AGGCAGCCAG AGTAGCGCAA
ATTGATAGTT TTATTCAGCG CTTGCCAGAG GGTTATGACA CCCAAGTTGG CGAGCGAGGC
TTAAAGCTTT CTGGCGGCGA GAAACAACGG GTTGCGATTG CTAGAACGCT TCTCAAGAAG
CCCGCCATGC TTATTTTTGA TGAAGCTACT TCTGCGCTAG ATTCGAAAAC AGAGCGCGCT
TTTCAGGAGG AGCTCCTGAA TCTGGCCAAA AACCGCACGA CGCTGATTAT TGCCCACCGA
CTTTCAACGG TTACTCATGC AGATCAAATC TTAGTAATGG ATCATGGAAA AATCGTAGAG
CGCGGTACCC ATATAGATCT ACTGGCAATA AAAGGGAAGT ATGCGGAGAT GTGGCAAATG
CAAGAGCACG TTACCCTTGA TTAA
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| Protein sequence | MRYSSGHHHG RVDSKTPQRG DWRVIRDLLP YLLEYRFRVI IALSCLISAK IANIGIPIVM
KELIDSLDIK ASSPQAILVV PLGVIVAYGL LRISASLFTE LREALFAKVT QNAVRKVALQ
VFEHLHSLAL SFHLARQTGG VSRDIERGTR GIQPLISYSL YSILPTLIEF CLVLSYFAYS
YDIWFAAVTL AALVLYIVFT IVVTEWRTHY RRTMNDMDSK ANQKAVDSLL NLETVKYFGN
EAFEAGRYDE NLLRYQAAAV KSQKTLAFLN LGQQIIIAVG LMLILWRATV GVVNGTMTLG
DLVLVNTLMI QLYIPLNFLG VIYREIKQSL TDMDRMFSLL NTEKEIADSP DAKPLQIQNQ
SYGPDVRFEN VSFHYDAKRE ILRDVSFNIP AGTITAVVGQ SGAGKSTLAR LLFRFYDVQS
GEILIDTQNI QDVTQASLRK AIGIVPQDTV LFNDTIGYNI AYGDPSASLD EVREAARVAQ
IDSFIQRLPE GYDTQVGERG LKLSGGEKQR VAIARTLLKK PAMLIFDEAT SALDSKTERA
FQEELLNLAK NRTTLIIAHR LSTVTHADQI LVMDHGKIVE RGTHIDLLAI KGKYAEMWQM
QEHVTLD
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