| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1592 |
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| Symbol | |
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| ID | 6183329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1391053 |
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| End bp | 1392084 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672112 |
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| Product | dihydroorotase |
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| Protein accession | YP_001798283 |
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| Protein GI | 171464170 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000060522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.517158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTCAGC CAGACGATTG GCACTTGCAT ATTCGTGATG GTGAAGTAAT GAAAGATGTT
TTGGCAGATA CTGCGCGTCA ATTTGCGCGT GCCATCATCA TGCCAAATTT AAAGCCACCA
GTAACAACTG TGGATTTGGC AAAAGCCTAT CAATCTCGAA TTGAATCGAA TTTAAAGTTT
CTGGGGGTGA GCGGTTTTAC ACCGTTGATG ACTTTGTACC TCATTGACAA TACTTCCGCA
GATGAAGTTC GTAAGGCTAA GAATGCAGGT ATTGTTGCGT TTAAGCTTTA TCCTGCTGGC
GCAACTACTA ATAGCGATGC TGGTGTGAGT GATCTCAAAT ATTGTCATGC GGTGCTCGAT
GTGATGCAGG ATGTTGGTAT GCCGCTCTTA GTGCATGGTG AAGTAACCAG TGCGGAAATT
GATATTTTTG ATCGTGAAGC CGTGTTTATT GATACGGTAT TAGATCCCTT GCGTAAAAAT
TTCCCAGATC TCAAAATTGT GTTTGAGCAC ATCACTACTA AGCAAGCGGC TCACTATGTA
CGTGATGCAG CTACTGGTGA AAAAAATACG ATTGTGGCAA CGATTACTCC GCAGCATTTG
CTGATGAATC GCAATGCGAT TTTTGCTGGC GGCGTTCGTC CGCATAACTA TTGCTTACCA
GTACTTAAGC GTGAAGAGCA TCGCGTTGCT CTGTTAGAGG TTGCTACTAG CGGTAACTCC
CGTTTCTTTT TGGGTACTGA TAGCGCGCCG CATGCTAAGG GTGCCAAAGA GGCTGCGTGT
GGTTGTGCAG GTTGCTATAG TGCATTTAAT GCATTGGGTT TATATGCCGA GGCATTTGAG
AGTGTCGGCA AACTGGATAA GTTAGAGGGC TTTGCTAGTT TCTTTGGCCC CGATTTTTAT
TCTTTGCCAC GCAATAGTGA AAAAATTACT TTGGTAAGAC AGGCGCAAAG TATTCCAATG
GAATTGCCAT TAGGCGATGC CACCACCGTT CCGCTGCGTG CTGGCGAAAC GATTGCTTGG
TCACTCGCCT AA
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| Protein sequence | MIQPDDWHLH IRDGEVMKDV LADTARQFAR AIIMPNLKPP VTTVDLAKAY QSRIESNLKF
LGVSGFTPLM TLYLIDNTSA DEVRKAKNAG IVAFKLYPAG ATTNSDAGVS DLKYCHAVLD
VMQDVGMPLL VHGEVTSAEI DIFDREAVFI DTVLDPLRKN FPDLKIVFEH ITTKQAAHYV
RDAATGEKNT IVATITPQHL LMNRNAIFAG GVRPHNYCLP VLKREEHRVA LLEVATSGNS
RFFLGTDSAP HAKGAKEAAC GCAGCYSAFN ALGLYAEAFE SVGKLDKLEG FASFFGPDFY
SLPRNSEKIT LVRQAQSIPM ELPLGDATTV PLRAGETIAW SLA
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