| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1585 |
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| Symbol | |
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| ID | 6183954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1384935 |
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| End bp | 1386167 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672105 |
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| Product | tyrosyl-tRNA synthetase |
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| Protein accession | YP_001798276 |
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| Protein GI | 171464163 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0249853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.548234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCA AACCAGAACA GAAATATCCT TTGACCCCTG AAGTCTTTGC AGCTCTCGAA
GTCACTAAGC GTGGTTGTGA TGAGTTATTG GTTGAGGCTG ATTGGGTTCA GAAGTTGGCC
CGCAGTCAGG CTACCAAAAC CCCACTTAGA ATTAAATTGG GTCTAGATCC AACGGCGCCC
GATATTCATT TGGGCCATAC TGTTGTTTTG AATAAGTTGC GCCAGTTACA GGATTTAGGC
CATACCGTTA TTTTCTTGAT CGGCGATTTC ACCAGCATGA TTGGTGATCC GTCGGGCCGC
AATGCGACAC GCCCACCTTT GACAGCAGAA GAAATCGCTA TCAATGCAGA GACTTATTAT
CGTCAAGCTA GTATGGTGCT AGATCCCTCC AAAACCGAAG TGCGTTACAA CAGCGAATGG
TGCGATCCAT TGGGCGCGCG TGGGATGATT CAGTTGGCAG CACGATATAC CGTTGCGCAA
ATGTTAGAGC GCGATGACTT TACTAAGCGC TACCGTAGTG GCGTTCCCAT CTCTGTACAT
GAGTTCTTGT ATCCATTGAT GCAAGGTTAT GACTCTGTTG CCTTGAAGAG TGACTTAGAG
CTCGGTGGTA TAGATCAAAA ATTTAATTTT TTAGTTGGCC GTGAACTCCA GCGTGAATAT
GGTCAAGAGC CGCAATGTAT TTTGACAATG CCGCTGCTAG TTGGTTTAGA TGGCGTGGAC
AAAATGAGCA AGTCCAAAGG TAATTACATT GGTATCAGCG AGCCTGCTGG CGAGATGTTT
GGCAAGCTTT TGAGTATCTC AGACGATTTA ATGTGGGATT ACTTCACATT ACTTTCTTTC
CGGCCAATGG CTGAAATTGA TTTGATGAAG CAAGAAGTTG CTGCTGGTCG AAATCCAAAG
GATTGCAAAG TACTGCTCGC CCAAGAAATC GTCGCACGCT TTCATTCACA AGCTGCAGCA
GAAAAAGCGC TAGAAGACTT TAATCATCGC GCTAAGGGCG GCATTCCCGA TGACATTCCA
GAAGTTAATC TTTCCGGGGC TCCAATGGGA ATTGCCAATC TTTTAAAGGC CGCTGGATTA
GCCCCTTCAA CATCAGAAGC CAATCGCAAC ATCGAGCAAA ATGGCGTGAA GATTGATGGT
ACAACAATTG CTGATAAACA ATTAAAAGTT GAAGCTGGAA ATTATGTTGT GCAAGTGGGA
AAGCGTAAGT TTGTGAAAGT GACGCTAGCT TAA
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| Protein sequence | MTAKPEQKYP LTPEVFAALE VTKRGCDELL VEADWVQKLA RSQATKTPLR IKLGLDPTAP
DIHLGHTVVL NKLRQLQDLG HTVIFLIGDF TSMIGDPSGR NATRPPLTAE EIAINAETYY
RQASMVLDPS KTEVRYNSEW CDPLGARGMI QLAARYTVAQ MLERDDFTKR YRSGVPISVH
EFLYPLMQGY DSVALKSDLE LGGIDQKFNF LVGRELQREY GQEPQCILTM PLLVGLDGVD
KMSKSKGNYI GISEPAGEMF GKLLSISDDL MWDYFTLLSF RPMAEIDLMK QEVAAGRNPK
DCKVLLAQEI VARFHSQAAA EKALEDFNHR AKGGIPDDIP EVNLSGAPMG IANLLKAAGL
APSTSEANRN IEQNGVKIDG TTIADKQLKV EAGNYVVQVG KRKFVKVTLA
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