| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1584 |
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| Symbol | ruvB |
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| ID | 6183937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1383868 |
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| End bp | 1384938 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672104 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001798275 |
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| Protein GI | 171464162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0383381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.43268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATTC ACACAGACAA CCTGAGCTCA ATTCCTGAAG ATTTACCTGA AGGGAATGAC
CGCATTGTGA GCGGCTCAGC CGGTAATGCT GAGGCCGTCT TTGAAAGAGC GCTGCGCCCT
AAGCAACTCA ATGAGTATGT TGGTCAAACT AAAGCACGTG CCCAATTAGA GATTTTCATT
AGCGCTACAA GAGCACGCCA AGAAGCTTTA GATCACGTTC TCTTATTTGG ACCTCCTGGC
CTTGGTAAAA CCACATTGGC CCACATCATT GCCAGGGAAC TTGGTGTTAA CTTGCGTCAA
ACCAGTGGTC CTGTGCTAGA TAGGCCCGGC GATCTTGCTG CCCTACTAAC CAATCTAGAG
GAAAACGATG TCCTCTTTAT TGATGAGATT CATCGTCTCT CTCCAGTTGT AGAAGAAATT
CTTTACCCTG CGCTTGAAGA TTACAGTCTA GACATCATGA TTGGCGAAGG TCCTGCAGCA
CGCAGCGTCA AAATTGATCT TAAGCCTTTC ACATTGATTG GCGCAACTAC TCGTGCCGGC
ATGCTCACCA ATCCATTGCG TGATCGTTTT GGCATTGTGG CAAGACTTGA GTTCTATACG
ACTAAAGAAC TCACCAAAAT TATTAATCGC TCAACCAGTC TACTCAAGGC TGACATTGAT
CCTGATGGCT CAATCGAAAT CGCCAAGCGT GCTCGTGGCA CTCCTCGTAT TGCTAACCGA
TTACTACGTC GTGTACGCGA CTATGCAGAA GTTAAAGGTA CAGGCACGAT TACTAAAGCC
ATGGCAGATG CAGCTCTCAA GATGCTAGAT GTCGATCCAA GCGGTTTTGA TGTGATGGAC
AGAAAATTAC TGGAAGCCAT CTTGCACAAG TTCGATGGTG GACCGGTGGG TATTGATAAC
TTAGCCGCAG CCATTGGCGA AGAACGTGAC ACTATTGAAG ATGTTCTAGA GCCGTATCTG
ATTCAGCAAG GCTACCTACA AAGAACCTCG CGTGGAAGGG TTGCTACTCG CCAGGCCTAT
GAGCACTTTG GCTTAACACC GCCAAGTGGC AGCGCAAGCC TAGATATTTA A
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| Protein sequence | MAIHTDNLSS IPEDLPEGND RIVSGSAGNA EAVFERALRP KQLNEYVGQT KARAQLEIFI
SATRARQEAL DHVLLFGPPG LGKTTLAHII ARELGVNLRQ TSGPVLDRPG DLAALLTNLE
ENDVLFIDEI HRLSPVVEEI LYPALEDYSL DIMIGEGPAA RSVKIDLKPF TLIGATTRAG
MLTNPLRDRF GIVARLEFYT TKELTKIINR STSLLKADID PDGSIEIAKR ARGTPRIANR
LLRRVRDYAE VKGTGTITKA MADAALKMLD VDPSGFDVMD RKLLEAILHK FDGGPVGIDN
LAAAIGEERD TIEDVLEPYL IQQGYLQRTS RGRVATRQAY EHFGLTPPSG SASLDI
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