| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1580 |
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| Symbol | |
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| ID | 6183308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1380809 |
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| End bp | 1381048 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641672100 |
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| Product | transcriptional regulator, Fis family |
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| Protein accession | YP_001798271 |
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| Protein GI | 171464158 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2901] Factor for inversion stimulation Fis, transcriptional activator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.27681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.75131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATA AGCACCCGAT TACTGAATGT ATTGAGACCC AATTGCAGGG CTACCTTAAT
GACCTCAAAG GCACTGCACC AAGCGATATT TATCAAATGA TTTTGGCTGT TGTAGAAAAG
CCGATGCTGG AGTTGGTCAT GCAACATGCC AAACAGAATC AATCATTGGC AGCCCAATAT
CTTGGCATCA ATCGCAATAC GCTTCACAAA AAACTCGTTG AACATCAACT GCTTAAGTAA
|
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| Protein sequence | MTNKHPITEC IETQLQGYLN DLKGTAPSDI YQMILAVVEK PMLELVMQHA KQNQSLAAQY
LGINRNTLHK KLVEHQLLK
|
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