| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1578 |
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| Symbol | |
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| ID | 6183632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1378456 |
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| End bp | 1379613 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672098 |
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| Product | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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| Protein accession | YP_001798269 |
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| Protein GI | 171464156 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.725588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCT CAAATTGCGA TATCTTGATT CAAGGCGGTG GTCCAGTTGG ACTAGCTTGC
GCCACTTGGA TACTGCAAAA ATTTCCCGAT GCCAATCTCA CATTAATAGA TCGCAATCCG
GTTAATGATG ACGATTTAGC AAATGCGGAT AGCCGTGGAA TTGCACTCTC ACATGGCAGC
AAACTATTGC TAGATACCAT TCAAGCATGG CCTAAAGAAT CCGCCCAAAT TCATCGTGTA
CATGTTTCAC AAGCTGGACG CTTTGGCCGA GCATTAATGA CCCGCGAAGA ACTCAATCAA
GATGCGCTGG GCCATATTAT TCGCTATCGC GACATCCACA TTACCCTGCG CCAGGCCTTG
AGAATGATTC AAGCTAAAAG TAAATACTTT GTTTGGCGAC ATATCGATAA AGAGGCAGAA
GAAAATAATA TCCACGCCAA ATGTATCGTG CATGCCGAGG GTGGTTTATT TAAAAAACAA
GATTGGGTAG AATCGGGTCG TGACTATGAT CAATCTGCTT TAGTCGGCTT AGTTGAGGTG
GAAAATGCTG CCCCACATCA GGCTTGGGAG CGTTTTACTT CTGAAGGTCC TCTAGCGGTT
TTACCAAGCC ACTATGGCCC AAATGTTCTC AATCTCATTT GGTGTGGCAC TCCATCATCC
TCACAACATC GCTTACAACT CAGTGATGAA GACTTCTTAA CTGAATTGCA AAATGAGTTT
GGCTTTCGCA TTGGACGCTT TTTGAAAATA CAAGATCGCC TCCTATACGA ACTTGGTTTG
AACTATCGCA AAGAAATTAC CAAAATCAAT GATGTTTGGA TTGGCAATGC TGCACAAACT
TTGCACCCAG TTGCAGGTCA AGGCTTGAAC TTAGGTTTGC GCGATGCCTT TTTATTGGCC
GAAAAGTTGG TTGGGGTATT TTCCGGAGCA GCAAAAGACC AATTGCAAAC AGATATACAA
AACGCACTTC AAAGTTACGC CCAAAGCCGC AAATTCGACA GAACAACGAC GATTGGTCTG
ACAGACTTTA TGGCCAGAGT ATTTACTTCT AATCTTGCCC CAATAGTGGT GGCCCGTGGA
TTGGCCTTAA GCGCTCTACA GTGGCTTCCT CCAGCAAAGA CGGCCCTAGC CCGGCAGATG
ATGTTTGGTA GGCGCTAA
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| Protein sequence | MSSSNCDILI QGGGPVGLAC ATWILQKFPD ANLTLIDRNP VNDDDLANAD SRGIALSHGS
KLLLDTIQAW PKESAQIHRV HVSQAGRFGR ALMTREELNQ DALGHIIRYR DIHITLRQAL
RMIQAKSKYF VWRHIDKEAE ENNIHAKCIV HAEGGLFKKQ DWVESGRDYD QSALVGLVEV
ENAAPHQAWE RFTSEGPLAV LPSHYGPNVL NLIWCGTPSS SQHRLQLSDE DFLTELQNEF
GFRIGRFLKI QDRLLYELGL NYRKEITKIN DVWIGNAAQT LHPVAGQGLN LGLRDAFLLA
EKLVGVFSGA AKDQLQTDIQ NALQSYAQSR KFDRTTTIGL TDFMARVFTS NLAPIVVARG
LALSALQWLP PAKTALARQM MFGRR
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