Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1577 |
Symbol | |
ID | 6183408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1377074 |
End bp | 1378441 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641672097 |
Product | peptidase M24 |
Protein accession | YP_001798268 |
Protein GI | 171464155 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAA CGAATATTTA TCAGCTTCGT AGAAATGACT TAGCAAAACA AATATTTGCC AAAACTGGTG GAGGTATTGC TGTTGTATCT ACGGCGCCTG AACTTGCTCG CAATCGCGAT AGCGAATTTC CATATCGTCA CGATAGTGAT TTTTACTATC TAACTGGCTT TGATGAGCCA AGCGCTACGC TAGTGATGAA AATTGAGGCT GAAGGAAAAA ACTTCCAGCT TCAATCTCAC TTATTTTGCA GACCCAAGGA TCCTGAACGA GAAATTTGGA ATGGCATTCG TTTAGGGCCC AATGCTGCCC CCGAAACTTT AGGCATTGAA TACGCTCATA GCAATCAAGA GCTAGACCAA AAACTGAGTG AGTTATTGGC CGATCAAGAT GCAATCTATG TTCGCCTCGC AGAAAGCGCT GAGGCCGATA GGCGCTTACG CCATTGGATG AAACAAGTCC GAGGACAAGC GCGCTCCGGC GTTAATCCTC CTTCAGAACT TCATGATGTA GAAGCGCTTA TTCATGAAAT GCGTTTATTT AAAGATGCAC ATGAAATCGA CATCATGCGT CGTGCTGCAG CCATCTCCGC TCGTGCACAT ATCCGCGCCA TGCAACTCTG CAAGCCTGGT ATGCGCGAGT ATCAACTCGA AGCTGAATTG CTTCATGAGT TTCGCAATAG CGGTGCACAA AGCGTCGCTT ACAACAGTAT TGTTGCTGGC GGTGAAAACT CATGCATCCT TCACTATCGC GCAGGATCAA CAGAATTACG CAATGGTGAT CTTTGCTTAA TTGATGCGGG ATGCGAGCTT GATGGGTATG CATCCGATAT CACCCGCACG TTTCCAGTCA ATGGAAAATT CACAGGGCCA CAACGTGCGC TGTATGACAT TGCGTTGGCA GCACAGGAAG CTGCAATAGC CATGACGAAA CCGGGCAATA CATTTATGCA GCCCCATGAG GCAGCCCTGA AAGTGCTTAC CCAAGGCCTG CTTGATGAAA AACTGCTTAA GCTCGCAGAG TTGGGTTCTC TCGATAACGC TATTGAAACT GGTGCTTATC GCCGCTTCTA TATGCACCAC ACATCACATT GGCTTGGCAT GGATGTGCAT GACGTAGGTT CTTACCGTGA AGCTAACAAA AGCCCGTCTA GCGAAGATAA GCCTTGGCGC ATCCTCAAGA GTGGTATGGT GATTACGGTT GAGCCCGGTC TTTACATCAG ACCAGTAGAA GATGTGGATA AAAAATTTTG GAACATTGGT ATCCGCATTG AAGATGATGC TGTTCTCAAT GATTCTGGAT GCGAACTCAT TTCTCGTGGC GTACCCGTCA AAGCCGATGA AATTGAAGCG CTCATGAAGA ACGCATAA
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Protein sequence | MNKTNIYQLR RNDLAKQIFA KTGGGIAVVS TAPELARNRD SEFPYRHDSD FYYLTGFDEP SATLVMKIEA EGKNFQLQSH LFCRPKDPER EIWNGIRLGP NAAPETLGIE YAHSNQELDQ KLSELLADQD AIYVRLAESA EADRRLRHWM KQVRGQARSG VNPPSELHDV EALIHEMRLF KDAHEIDIMR RAAAISARAH IRAMQLCKPG MREYQLEAEL LHEFRNSGAQ SVAYNSIVAG GENSCILHYR AGSTELRNGD LCLIDAGCEL DGYASDITRT FPVNGKFTGP QRALYDIALA AQEAAIAMTK PGNTFMQPHE AALKVLTQGL LDEKLLKLAE LGSLDNAIET GAYRRFYMHH TSHWLGMDVH DVGSYREANK SPSSEDKPWR ILKSGMVITV EPGLYIRPVE DVDKKFWNIG IRIEDDAVLN DSGCELISRG VPVKADEIEA LMKNA
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