| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1571 |
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| Symbol | |
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| ID | 6183599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1369574 |
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| End bp | 1370368 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672092 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_001798263 |
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| Protein GI | 171464150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.836645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGTG CACGTAAACG ATTTGGGCAA AACTTTTTAC AAGACAATGG CATTATTTAC
TCTATTGTTG CGCTAATTAA TCCTAGTGCT GATATGCGCG TAATTGAGAT TGGTCCTGGC
CTTGGCGCAT TAACATTGCC CTTGCTCAGT AATCTTGATC ACTTAGATCT TTTGGAGATT
GATCGTGACT TAGTGGCTTT TTGGAATGAA AAAAATCTCC AGGGCTTAGC GGTCACCGAG
GGCGATGCCC TTAAGTTCGA TTTCTTGGCA TGGGCGCAGA ATCGGTCGAC TAAGCAAGGC
TTATGTAAGG TAGTGGGTAA TTTACCTTAC AACATCTCAT CACCATTGTT ATTTCATTTG
GTTTCAGCGG CAGCATCAAT TGATGAGCAA GTCTTTATGT TGCAGGCAGA GGTTGTCGAA
AGAATGGTTG CTAAGGCTGG AAGTTCAGAC TTCAGCCGCC TTTCTGTGAT GCTGCAAGCG
CGCTACGATA TGGAGTTGGT ATTAGAAGTG CCACCCGAGG CCTTTGATCC ACGGCCTAAG
GTGAATTCAG CCGTGGTGCG CATGATCCCT AGACGGGATT TCACATTAAG CGATGCTGAG
TGGAGTGCTT TAGAGAAGGT GGTGGCTGCA GCCTTCTCCC AAAGAAGAAA AATGCTGCGT
ACTAATCTGC AGGATTTTGC AGACAGGCTA GGTTTGACTG AGGTTGAACT TAAGGCGAGA
GCCCAAGATA TTTCAGTGGA CCACTATATC GAGTGGGCTA AAGTTCTTGC TACTCAAGTT
AATACACAGT ATTAA
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| Protein sequence | MHRARKRFGQ NFLQDNGIIY SIVALINPSA DMRVIEIGPG LGALTLPLLS NLDHLDLLEI
DRDLVAFWNE KNLQGLAVTE GDALKFDFLA WAQNRSTKQG LCKVVGNLPY NISSPLLFHL
VSAAASIDEQ VFMLQAEVVE RMVAKAGSSD FSRLSVMLQA RYDMELVLEV PPEAFDPRPK
VNSAVVRMIP RRDFTLSDAE WSALEKVVAA AFSQRRKMLR TNLQDFADRL GLTEVELKAR
AQDISVDHYI EWAKVLATQV NTQY
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