Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1570 |
Symbol | |
ID | 6183438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1368825 |
End bp | 1369559 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641672091 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_001798262 |
Protein GI | 171464149 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.983241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGA TTCGCTCCAT CCTCTTTGCC TTATTTTTAG TGGTGTTCAC ACCCGTGTGG TCAGCGCTAT GTATGCTGGC CTTTCCATTT CTAAGTCCAG AAAATCGATA CACTTTTATT GGCCTATGGA ATAAGGTTGT AATTGCTTTA TTAAAACCAC TCTGTGGCAT TCATTACGAA ATCCGTGGCA TGAAAAACAT GCAAGCCGTT ATCAATGAAC GCGTCATCAT CCTGAGCAAG CATCAATCCG CTTATGAAAC AATTGCCTAT ATCGCCTTAC TGCCAAAACA GCTATGTTTT GTATTTAAGA GAGAGTTACT CTGGATTCCA TTCTTTGGCT GGGCATTGGC TCTCCTAAAA ATGATCCACA TTAATCGCTC TAACAAACAG ACTGCCGCTC ATTCTGTGGC TACTCAAGGT AGAAAACGCT TAAGCGAAGG CAAATGGATC ATGCTTTTTC CAGAGGGCAC CAGAACGGCC ACCGGCTCAA CCAAACCTTA CCGTAAAGGT GGCGCACGCT TAGCCAGCGC TACGGATGCC TTGGTAATTC CAATTGCACA CAATGCTGGA CGCTGCTGGC CAAAAAATAG CTTTATCAAA AACCCCGGTA CGGTTATTTT TTCAATAGGC CCTGCGATCA GCTCAGCCAA TAAATCAGCA GAACAACTTC AGCAAGAGGT TGAAGGTTGG ATTGAAGCCG AAATGCGTAT AATTGACCCA AGCGCTTATA AATAA
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Protein sequence | MQLIRSILFA LFLVVFTPVW SALCMLAFPF LSPENRYTFI GLWNKVVIAL LKPLCGIHYE IRGMKNMQAV INERVIILSK HQSAYETIAY IALLPKQLCF VFKRELLWIP FFGWALALLK MIHINRSNKQ TAAHSVATQG RKRLSEGKWI MLFPEGTRTA TGSTKPYRKG GARLASATDA LVIPIAHNAG RCWPKNSFIK NPGTVIFSIG PAISSANKSA EQLQQEVEGW IEAEMRIIDP SAYK
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