| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1568 |
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| Symbol | glyS |
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| ID | 6183895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1366110 |
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| End bp | 1368248 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672089 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001798260 |
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| Protein GI | 171464147 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.269615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CTAATTCAAA ACCTCAATCA GCTACTTTAT TGATTGAGGT ATTTACAGAA
GAACTTCCAC CAAAATCATT GCGTCGTTTA GGCGATGCAT TTAGTGAAGG CATTTTTGCG
GCACTCAAAT CTGCAGGCCT GGCAACTAAA TCTTCCAAGG TGACTGGCTT TGCTACACCA
CGCCGTTTAG CAGTTCAAGT TACCGATGTA CTAGACCAAG CTCCAGATTT TCCTGTACGT
GAAAAATTGC TTCCGACGAG CAATGCATTT GATGCCGAAG GTAAGGCAAC AGCGCCCTTA
TTGAAAAAAT TGAGCGCACT TGGATATGCT GATGTTGATC TTTCCAGCTT AGAAAAAGCT
GGCGAAGGCA AGAATGAAGC TTTATACCTT AACGTCATCG CCAAAGGTGC TGCACTTGAG
CAAACAGCCC AAGTTGCACT TGAGCAAACT TTAAATAAGT TACCGATTGC CAAAATGATG
CATTACCAGG TCCCGCAAAA AGATGGTCAG TTAGCCGACG TGCAATTCGC GCGCCCCGCT
CACCGCATCA TTGCACTCCA CGGCGACACC ATTCTCAATA TCAGCGCATT AGGTATCCAT
GCTGGCAATA AAACTGAGGG GCATCGCTTC TTAGCCCCCG GCAATGTGGC TATTGGCAAT
GCAAATCAGT ACGAATCAGA CTTACAATCC AAAGCAAAAG TTATTCCTAG CTTTAATCAG
CGTCGAGCAA AAATTGAAGC TGCTATATTA AAAGCGGCAG GCGATGATCT AGTTTTGATG
CCAGACAGTC TTTTAGATGA AGTAACGGCC CTGGTTGAAT GGCCGGCAAT CTACGAATGC
CACTTTGATC AAGAGTTCTT AGAAGTTCCT CAAGAATGCT TGATTTTGAC AATGCAAACC
AATCAAAAAT ACTTTGCATT GACTGATAGA CAGGGAAAAT TACGCAATCG TTTTTTGATT
GTTTCTAATA TCGAAACCAA TAAACCGAAT GCCATTATTT CTGGTAACGA GCGCGTTGTG
CGCCCACGAT TATCAGATGC TCGCTTCTTT TTCCAGCAAG ATCAAAAAAG ACCGCTAGCT
TCACGCGTAG CTAACCTTGG CAAGGTGGTT TATCACAATC AACTAGGTAA CCAATTAGAC
CGCACCAGGC GCGTGCAAGG CCTTACTGTA GGTATAGCCA AAAAATTAAA TGCCGATGAA
AAACTTGCCT CACGCGCAGC CGAAATTGCT AAAACAGACT TACTAACCAA TATGGTTGGT
GAATTCCCAG AGCTTCAAGG AATTATGGGT CGCTACTACG CTACTCATGA TGGCGAGAAC
GCTGATGTTG CAAGCGCCTG TAGCGAGCAC TACATGCCAC AGTTTGCAAG CGATGCCTTG
CCACAAACTC AAACTGGAAC CATCCTAGCA ATCGCAGACA AATTAGAGAC CCTAGTAGGT
ATTTGGGGTG TAGGCCTTGC TCCAACGGGC AATAAAGACC CATACGCGCT TCGCCGACAT
GCTCTGGGCA TTTGTCGTTT ACTCTTAGAA AAAAATCTTT CACTCAGTTT GCCAGAGTTA
ATCGAATTAT CCCGCGCACA GTTTCCACAG GCTGATGTAC AAGAAAAAGC TAAGGCAGCA
GATATCTATG CTTTCATCAT CGATCGCTTA CGCGCTTATT TGCGCGACCA ATCCGTTGCT
GGCAAAGCAT TTACAAGCGC AGAAATTGAC GCTGTACTCA GTCAAGAGCC CGCACAACTA
AATGACCTGA TTGAACGCTT AACTGCTTTA CGTGAATTTA ATGCTCTTGC AGAAGCCGCC
CAACTTGCAG CTGCCAATAA GCGCATTAGC AACATCCTGA AGAAAACAAC TACCGCGATT
CCTGTAACTT GCTCTGCTAA ATTACTGCAA ATTCCAGCAG AGACTGCATT GCATCAGGCA
TTGGAGACAG TTGCACCCGC ACTCAATGCG GCTTATGAAA AACGTCAGTT TGTTGAGCTT
CTAAGATCTC TTGTTGCTTT AAGTGGCCCA ATTGACCAGT TCTTTGCTGA TGTCATGGTC
ATGGATCCCA ACTCAGAGCT GCGCGATAAC CGCCTAGCTC TCCTGCAACA ACTTCACCAG
AAAATGAATC TCGTTGCCGA TCTCGGCAAA TTAGCATGA
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| Protein sequence | MSTSNSKPQS ATLLIEVFTE ELPPKSLRRL GDAFSEGIFA ALKSAGLATK SSKVTGFATP
RRLAVQVTDV LDQAPDFPVR EKLLPTSNAF DAEGKATAPL LKKLSALGYA DVDLSSLEKA
GEGKNEALYL NVIAKGAALE QTAQVALEQT LNKLPIAKMM HYQVPQKDGQ LADVQFARPA
HRIIALHGDT ILNISALGIH AGNKTEGHRF LAPGNVAIGN ANQYESDLQS KAKVIPSFNQ
RRAKIEAAIL KAAGDDLVLM PDSLLDEVTA LVEWPAIYEC HFDQEFLEVP QECLILTMQT
NQKYFALTDR QGKLRNRFLI VSNIETNKPN AIISGNERVV RPRLSDARFF FQQDQKRPLA
SRVANLGKVV YHNQLGNQLD RTRRVQGLTV GIAKKLNADE KLASRAAEIA KTDLLTNMVG
EFPELQGIMG RYYATHDGEN ADVASACSEH YMPQFASDAL PQTQTGTILA IADKLETLVG
IWGVGLAPTG NKDPYALRRH ALGICRLLLE KNLSLSLPEL IELSRAQFPQ ADVQEKAKAA
DIYAFIIDRL RAYLRDQSVA GKAFTSAEID AVLSQEPAQL NDLIERLTAL REFNALAEAA
QLAAANKRIS NILKKTTTAI PVTCSAKLLQ IPAETALHQA LETVAPALNA AYEKRQFVEL
LRSLVALSGP IDQFFADVMV MDPNSELRDN RLALLQQLHQ KMNLVADLGK LA
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