| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1564 |
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| Symbol | |
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| ID | 6184566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1362249 |
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| End bp | 1362722 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641672085 |
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| Product | protein of unknown function UPF0054 |
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| Protein accession | YP_001798256 |
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| Protein GI | 171464143 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACTA ACAGAAAAAC TATGTCTCCT AAGCTGGTGA TTGATTTGCA ATATGCCAGC
GCCACCATTG AATCAACCCT TGGCAAAATT GCGTCGCCTA CCTTGATGAA AAAATGGGTA
AAAAGTGCAA CACCCCTTGG TGGCCTGATT ACACTTCGCT TTGTGAATAC GACTGAAGGT
AAAAAGTTGA ACTTGGCTTT TCGCCAAAAA GATTACGCCA CCAATGTATT AACTTTCCCT
TATGCGCTTT CAAAAAACGA CTTAGCAGCA GATATTATTT TCTGCCTCCC CGTATTACAG
AAAGAAGCAA AAGAACAAGA TAAGTTACTG AAAGCCCATT TAGCCCATTT AATTGTGCAC
GGCTGCCTTC ATGCACAAGG CTACGATCAT GAACTTACCA AGGACGCCAA AAAAATGGAG
GCCCTAGAAA TCCATATTCT CGAAAAATTG GGCTTTGCCA ATCCATACTC ATAA
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| Protein sequence | MSTNRKTMSP KLVIDLQYAS ATIESTLGKI ASPTLMKKWV KSATPLGGLI TLRFVNTTEG
KKLNLAFRQK DYATNVLTFP YALSKNDLAA DIIFCLPVLQ KEAKEQDKLL KAHLAHLIVH
GCLHAQGYDH ELTKDAKKME ALEIHILEKL GFANPYS
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