| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1563 |
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| Symbol | |
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| ID | 6183691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1360913 |
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| End bp | 1362259 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641672084 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001798255 |
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| Protein GI | 171464142 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.739198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCTATATCAA AACCTTCGGC TGTCAAATGA ACGAGTATGA CTCGGGCAAG
ATGGCCGACC TCTTGCACGC TGATGAAGGC ATGGTCATGA CAGATCGCCC AGAAGATGCA
GACGTGGTGC TTCTTAACAC CTGCTCCATT CGAGAAAAGG CTGAAGACAA AGTCTTCTCT
GATTTAGGCC GACTACGCGA ACTTAAAAAA ACTAAACCTA ATCTCCTTAT TGGTGTTGGC
GGCTGTGTTG CTAGCCAAGA AGGTCAGCAA ATAGTAAGTC ATGCGCCCTA TGTTGATGTG
GTTTTTGGTC CACAAACATT ACATCGCTTG TCAGACCTCA TTGCAAAGCG TCGAGAAACC
GGCCTCTTTC AGGTTGACAT CTCTTTTCCG GAAATTGAAA AGTTTGATCA TCTTCCTGCA
TCACGCCAAA CTCGTGGCTC AGCCTATGTA TCGATCATGG AAGGCTGCTC TAAATATTGC
AGCTACTGCG TTGTTCCCTA TACGCGTGGC GAAGAAGTCT CTAGATCATT TGATGATGTG
CTTACCGAGG TGGCTGGACT AGCCAGCAAA GGTGTCAAAG AAATTGTTTT GCTTGGCCAA
AACGTAAATG CGTATTTGGG CAAGATGGGT GACCGCCAAG AAATTGCCGA CTTTGCCCTT
CTCATTGAAT ATATCGTCGA AATTCCGGGA GTTGAGCGGA TTCGATTTAC TACCAGTCAT
CCAAAAGAAT TTACGCAACG CCTCATTGAT GTGTATACCA AAGTGCCAAA ACTAGTAAGC
CACTTACATC TGCCAGTACA GCATGGATCA GATGCCATGC TATCCGCGAT GAAGCGTGGT
TATACAGCGT TGGAATTCAA AAGCATTATT CGCAAAATGC GCGCAGTCCG CCCTGACCTC
ACACTATCGA GCGACTTTAT TGTGGGCTTT CCAGGTGAAA CTGAAGCTGA CTTTGAAAAG
TTACTCAAGA TGGTGGAAGA GCTTAATTTT GACAACAGCT TTTGCTTCAT CTTCAGCCCT
CGTCCCGGCA CCCCGGCAGC TAATCTGCAT GATGACACGC CGTATGAAGT AAAGCTCAAG
CGTTTGCAAA CCTTGTTAGC ACTGGTTGAA AGCCAAGCAA ATCAAATTAG TCAAAAAATG
TTGGGCAATA TCGAACGCGT CTTGATTGAG GGCCTCGCAA AGGATGGCAT TAACTTACAG
GGTCGAGCAG AAAACAATCG TGTGATTCAT TTCACGGCAC CAGCTCAGAA TATAGAAAAC
CTGATCGGCC AAATGGTAGA CATCCGTATC ACCGAAGTTC TTAACTACAC CCTACGAGGC
AAACTAGTAG AAGCGTATGT CCACTAA
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| Protein sequence | MKKLYIKTFG CQMNEYDSGK MADLLHADEG MVMTDRPEDA DVVLLNTCSI REKAEDKVFS
DLGRLRELKK TKPNLLIGVG GCVASQEGQQ IVSHAPYVDV VFGPQTLHRL SDLIAKRRET
GLFQVDISFP EIEKFDHLPA SRQTRGSAYV SIMEGCSKYC SYCVVPYTRG EEVSRSFDDV
LTEVAGLASK GVKEIVLLGQ NVNAYLGKMG DRQEIADFAL LIEYIVEIPG VERIRFTTSH
PKEFTQRLID VYTKVPKLVS HLHLPVQHGS DAMLSAMKRG YTALEFKSII RKMRAVRPDL
TLSSDFIVGF PGETEADFEK LLKMVEELNF DNSFCFIFSP RPGTPAANLH DDTPYEVKLK
RLQTLLALVE SQANQISQKM LGNIERVLIE GLAKDGINLQ GRAENNRVIH FTAPAQNIEN
LIGQMVDIRI TEVLNYTLRG KLVEAYVH
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