Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1548 |
Symbol | |
ID | 6183904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1348418 |
End bp | 1348936 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641672072 |
Product | regulatory protein RecX |
Protein accession | YP_001798244 |
Protein GI | 171464131 |
COG category | [R] General function prediction only |
COG ID | [COG2137] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000023294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TAGGTAATAA AAAGCCCAAA CAAAGCCCGA GTCTCAAAGC TCGGGCTTTG CGCCTTTTAT CCCTGAGGGA ATACAGTCGC AAAGGTTTGG CCGCCAAATT GGCTGAATCG GAGGCGAGAT GGGGCAAGCT GGGTGGAGTT CAGGCTGAGC AAACACCAGA ATCCAGGGAT TCTCAGATTG AAGCGGTTTT AGATGATTTT GAGGCCAGGG GCTGGCTATC GGATGAGCAT TTTGCAGAGA CCTTGGTCCG CCGTCGGAGC GAGCGTTATG GAATTAGAAA GATAGCTGAC GAGCTCGAAA GGGCTGGGGT AGATCCCAAG CAGTCAGTCA AGCTGCTGAT GGATCTCAAA GAGACTGAAT TTCAGCGTGC TTATGACCTT TGGATGCGGA AATATGGCCG GCGCGCCACT GAACAGAAGG AGCGTGCCAG GCAATACCGA TTTCTCGCTT CCAAGGGATT TGGATCCGAT ATTGTGGCCA GGGTCATAGG CGGACAAACC CCCGATTAG
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Protein sequence | MSELGNKKPK QSPSLKARAL RLLSLREYSR KGLAAKLAES EARWGKLGGV QAEQTPESRD SQIEAVLDDF EARGWLSDEH FAETLVRRRS ERYGIRKIAD ELERAGVDPK QSVKLLMDLK ETEFQRAYDL WMRKYGRRAT EQKERARQYR FLASKGFGSD IVARVIGGQT PD
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