| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1547 |
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| Symbol | sucC |
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| ID | 6183396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1347059 |
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| End bp | 1348228 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672071 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_001798243 |
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| Protein GI | 171464130 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00163339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC ATGAGTACCA AGGCAAAGAA CTTCTTCGCC AATTTAATGT GCCTGTTCCT
AACGGCATTC CCGCATTTAG TGTTGATGAG GCAGTCAAAG CTGCTGAAAA ACTCGGCGGC
CCTGTGTGGG TTGTTAAAGC ACAGATTCAT GCTGGTGGTC GCGGTAAAGG CGGCGGCGTG
AAATTGGCAA AGAGCATGGA TGAAGTTAAG AGATATGCTT CTGAAATTTT GGGCATGCAG
CTCAAGACGC ATCAAACTGG ACCAGAAGGT CAAAAAGTTA ATCGCCTTTT AATCGAAGAT
GGCGCTGATA TTAAAAAAGA GTACTACTTC AGTATCGTTA CAGACCGCGG AACACAGAAG
AACGTGATCA TGGCTTCCAG CGAAGGCGGT ATGGATATTG AGGAGGTAGC TGAATCTCAT
CCAGAAAAAA TTATCAAAGT ATTTGTTGAT CCAATGGTTG GTTTGACAGA TGCGGATTGC
GACATTATTG CTAAAGGAAT TGGCGTACCA GAGGCATCCA TTCCTATGGC ACGAGACGTA
TTTAAAAATC TCTACAAAAC TTACTGGGAT ACCGATGCTT CATTGGTTGA AATCAACCCA
TTGATTCTTG AGGGTAACGG CAAAATTAAA GCTTTGGACG CTAAGTTCAA TTTTGATCCA
AACGCATTGT TCCGCCACCC AGAAATCGTT GCCTACCGCG ATATCGACGA AGAAGATGCT
GCTGAAATCG AAGCTTCTAA ATTTGATCTT ACTTACATTT CTCTAGATGG CAATATTGGT
TGTTTAGTTA ACGGTGCGGG CTTGGCGATG GCCACAATGG ACGCAATTAA GTTGTTTGGT
GGCGAACCAG CAAACTTCTT GGACGTTGGT GGTGGCGCTA CAGCTGAAAA AGTAACTGAA
GCATTCAAAA TCATGTTGAA GAACAAGAAC GTTCAAGCGA TTTTGGTAAA TATTTTCGGC
GGCATTATGC GTTGCGACGT GATTGCTGAT GGTGTTGTTA CTGCATGTAA AGTAGTAAAT
CTCACAGTAC CTTTGGTTGT GCGTATGAAG GGTACAAACG AAGAGCTCGG CAAGAAAATT
CTTGCGGACT CTGGTTTGCC AATTATTAGC ACCGACTCAA TGACTGAAGC CGCTACTAAG
GTAGTTGCTG CTGTTGCCAA AAACAAATAA
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| Protein sequence | MKIHEYQGKE LLRQFNVPVP NGIPAFSVDE AVKAAEKLGG PVWVVKAQIH AGGRGKGGGV
KLAKSMDEVK RYASEILGMQ LKTHQTGPEG QKVNRLLIED GADIKKEYYF SIVTDRGTQK
NVIMASSEGG MDIEEVAESH PEKIIKVFVD PMVGLTDADC DIIAKGIGVP EASIPMARDV
FKNLYKTYWD TDASLVEINP LILEGNGKIK ALDAKFNFDP NALFRHPEIV AYRDIDEEDA
AEIEASKFDL TYISLDGNIG CLVNGAGLAM ATMDAIKLFG GEPANFLDVG GGATAEKVTE
AFKIMLKNKN VQAILVNIFG GIMRCDVIAD GVVTACKVVN LTVPLVVRMK GTNEELGKKI
LADSGLPIIS TDSMTEAATK VVAAVAKNK
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