| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1546 |
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| Symbol | |
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| ID | 6183788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1346150 |
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| End bp | 1347043 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672070 |
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| Product | succinyl-CoA synthetase subunit alpha |
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| Protein accession | YP_001798242 |
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| Protein GI | 171464129 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.273523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTT TGATCAATAA AAACACCAAA GTCATTACAC AAGGTATCAC TGGTAAGACC
GGTCAGTTCC ATACTGAGAA ATGTCAGGAA TACGCAAACG GCAAAAACTG TTTTGTTGCC
GGTGTAAATC CTAAAAAAGC TGGCGAGTTC ATTTTTAATA TTCCTATTTA TGGGACTGTT
AAAGAGGCTG CTCAGCAAAC TGGTGCAACG ACTTCAGTAA TTTATGTTCC GCCTCCTGGT
GCTGCTGCAG CGATTTGGGA AGCTGTTGAG GCTGACCTCG ATTTTGTTAT TTGTATTACT
GAAGGTATTT CTGTGCGTGA CATGCTTGAA GTGCGTAACA AGATGCATGC AAAAGAAGCT
GCTGGTGGTA AGAAGACTTT ATTGCTTGGT CCTAACTGTC CAGGCATTAT TACTCCAGAC
GAAATCAAGA TCGGCATCAT GCCGGGTCAC ATTCATAAGA AAGGCCGCAT TGGCGTTGTT
AGCCGTTCCG GTACATTAAC TTACGAAGCA GTTGGTCAAT TGACAGCAAT TGATTTGGGT
CAGTCCACAG CAGTAGGTAT CGGTGGTGAC CCAATTAATG GCTTGAAGCA TATCGACATC
ATGAAAATGT TCAATGAAGA TCCAGAGACT GATGCTGTGA TCATGATTGG CGAAATCGGC
GGTCCAGATG AGGCTGAGGC AGCTCGCTGG TGTAAAGACA ACATGAAAAA GCCGGTAGTT
GGCTTTATTG CTGGTGTTAC AGCGCCTCCA GGCAAGCGTA TGGGTCACGC AGGTGCGTTG
ATTTCTGGCG GTGCTGATAC TGCTGATGCC AAGCTTGCCG TTATGGAAGA GTGTGGCTTC
AAAGTAACAA GGAACCCATC AGAAATGGCT GCTTTGTTGA AGGCCATGTT GTAA
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| Protein sequence | MSILINKNTK VITQGITGKT GQFHTEKCQE YANGKNCFVA GVNPKKAGEF IFNIPIYGTV
KEAAQQTGAT TSVIYVPPPG AAAAIWEAVE ADLDFVICIT EGISVRDMLE VRNKMHAKEA
AGGKKTLLLG PNCPGIITPD EIKIGIMPGH IHKKGRIGVV SRSGTLTYEA VGQLTAIDLG
QSTAVGIGGD PINGLKHIDI MKMFNEDPET DAVIMIGEIG GPDEAEAARW CKDNMKKPVV
GFIAGVTAPP GKRMGHAGAL ISGGADTADA KLAVMEECGF KVTRNPSEMA ALLKAML
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