Gene Pnec_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1536 
Symbol 
ID6183447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1339525 
End bp1339959 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID641672063 
Producthypothetical protein 
Protein accessionYP_001798235 
Protein GI171464122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAAC TTGCCAGACT CTTTCATAAT GCTGACGATG TTGTAGAAGC TTGGCGAGAT 
GCACTAAGTC ATCGAGATGT TCAAAGCGCT CTGGATATTT GGCTGGATGA TGACTCCATC 
ACCTGCGTCC TCCCAGAAGG ACACCGCCTC ACTGGTCATG CCGAAATTCG CGATGGCTTA 
GAGCGACTGC TCGCAAAACA GCCTCTATTT TTAGAGCCTA TTGCTTGTAT CAGCCATTCT 
GTACTTGGCG CCGCCGTTTA CGACACTACT GAAGCCGTTC ATCTCAGAGC CGATCAAATT 
GAAGTAGAGT TTTTCCTGAA CATCACATTG GTACTTCTGC AAGATAGTCA GGGCTGGCGC 
ATTGCGCACT TGCACGCTAG TCACTCCACT GAAGAAACCT TCGACGCACC ATCTATACCA 
CACAGCTTGC ACTAA
 
Protein sequence
MPKLARLFHN ADDVVEAWRD ALSHRDVQSA LDIWLDDDSI TCVLPEGHRL TGHAEIRDGL 
ERLLAKQPLF LEPIACISHS VLGAAVYDTT EAVHLRADQI EVEFFLNITL VLLQDSQGWR 
IAHLHASHST EETFDAPSIP HSLH