Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1535 |
Symbol | |
ID | 6183649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1338467 |
End bp | 1339507 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641672062 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001798234 |
Protein GI | 171464121 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGTA TTCTGATCAT CGCCCCAAAC TGGATTGGGG ATGCAGTGAT GACACAGCCT TTGCTGGCGT CTCTTAAATC ACAATATCCA GAATCAACCA TTGATGTACT TGCGAGCACT TGGGTTACAC CGATCTATCG TGCTTGTGCC GAAGTAAATG ATGTCCTTGA AGCAAAGTTT GAGCATAAGC AATTGCAGTG GGGCTTACGC AAGCAGTTAG CCAAAGAGCT GGCCGCAAAA AAATATCAAG TGTGTTTTGT ATTACCTAAT AGCTTGAAGT CAGCGCTGAT TCCTTGGCTT GCCAATATTC CCTTTCGAGT TGGCTATCGT GGTGAGTTGC GATTTGGTCT AATTAACGTT GCTTTAGACA ACCCAAGCAA GGTCAATCGC CCACCCATAG TCGAACACTA CCTTCAATTG GGCCGGCTTT TAAATAACGA GCGGACTTCA CCAACCACCG CCAATCTCAC ACCCCAGTTA AATGTATCCG CTGAAGCTAC TCACTCAGTA GAAACAAAAT TAACAAATAT TCATATTGAT CAAGCGAACA TTTATGTAAT GTGTCCCGGG GCTGAATATG GCCCAACTAA GCGCTGGCTG ACCAGTCATT TTGCGCAATT AACGGAAGGT TTGATCGCCA ATAATCCAAA TAATCAAATC GTTCTTTTGG GCAGTAAAGG CGATTACACA CTTGGCAGTG AGATTCAAGC TCAAGCCAAG CAGAACGATC ATATTCATAA CTGGTGTGGC GACACGTCTC TTGATGAAGC GATTGCTCTC ATAGGAATGA GCAAAGCGGT CATTAGCAAT GATTCCGGCT TAATGCATAT TGCAGCCGCC CTCAAAACTC CGCAAGTTGC TATTTTTGGA TCGAGTGATC CAGCCCATAC GCCACCCCTA TCCGACAAAG CCAAAGTCAT TTGGCTCAAT TTACCATGCA GTCCGTGTCA CAAAAGAGAG TGTCCACTAA AGCATTTAAA GTGCTTAAAT AACATCTTGC CTGCACAGGT ATTGTCCACA CTGAGCACAT TGCAGCCCTA A
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Protein sequence | MHGILIIAPN WIGDAVMTQP LLASLKSQYP ESTIDVLAST WVTPIYRACA EVNDVLEAKF EHKQLQWGLR KQLAKELAAK KYQVCFVLPN SLKSALIPWL ANIPFRVGYR GELRFGLINV ALDNPSKVNR PPIVEHYLQL GRLLNNERTS PTTANLTPQL NVSAEATHSV ETKLTNIHID QANIYVMCPG AEYGPTKRWL TSHFAQLTEG LIANNPNNQI VLLGSKGDYT LGSEIQAQAK QNDHIHNWCG DTSLDEAIAL IGMSKAVISN DSGLMHIAAA LKTPQVAIFG SSDPAHTPPL SDKAKVIWLN LPCSPCHKRE CPLKHLKCLN NILPAQVLST LSTLQP
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