| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1527 |
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| Symbol | |
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| ID | 6183380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1330684 |
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| End bp | 1331868 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672054 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_001798226 |
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| Protein GI | 171464113 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.856042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATC GTATGGAACC TATTTTGCCG GGTTCATATT TAGGAATTTT AGGTGGCGGT
CAATTAGGGC GCATGTTCAC ACAAGCTGCC CAAGCGATGG GTTATAAGGT TTGCGTCCTT
GATCCTGGTT CTGATAGTCC TGCCGGCTCG ATTGTCGAAA AATTTATTCA AGCTGAATAT
ACAGACTCTG CAGCCTTAAA AGAGATGGCG TCATTGTGCG CTTCAGTAAG CACTGAATTT
GAAAATGTTC CTGCCCAAGC CTTGGATGAG TTGGAATCCT TAGGTGTTTT TGTAGCTCCA
CGCAGTAGTT GCGTCTCTTT AGTGCAAAAC CGTATTGCTG AGAAAAATTT CTTAGCTACT
TGGAAGTCGG AAACCAATAT TGGTCCAGCC CCCAATTTTG TGATTGAACA TGAAGCAGAT
ATTGCCCATA CTCCAACCAA TCTCTTTCCC GGGATCTTGA AGACTGCCCG TATGGGCTAT
GACGGCAAAG GTCAGGCGAC TGTCTATAGC GCTAAAGAAT TGTCCACCGC CTGGAATGAG
TTTGGTCGAG TGCCTTGCGT ATTAGAAAAG CGCATGGATT TGGACTTTGA AGTATCTGCT
CTGGTTGTGC GTGGATACGA TGATGCGGTA GTGGCTTACC CAGTTTCGCA AAACATTCAT
CGCGACGGTA TTTTGCATAC CTCTACTGTG CCAGCGCCTT CGCTAAAGCC GGCTCAAGAA
AAAAAGATTG TTGAGGCAGC AAAAGCGCTG ATTCGTAAGA TCGACTACGT AGGCGTGCTT
TGCGTGGAAT TCTTTGTACT CAAGAATGGC GACATTATTG CTAATGAGAT CGCGCCGCGT
CCACATAATT CTGGGCACTA CACAATGGAT GCTTGTGTCA GCAGCCAGTT CGAGCAGCAA
GTAAGAGCGA TGGCAAGATT GCCTTTGGGC GATACCCGTC AGTTAGCCCC TGTTTCAATG
CTGAACTTGT TGGGAGATCT GTGGTTTGAG GGTAGTGAAG ATCAGCCAAA AGAGCCTGCT
TGGAATAAGG TGCTAGCCCA TCCTGATGCA AAGCTGCATT TGTATGGAAA GTCTGAGCCT
CGTATCGGTA GAAAAATGGG TCATATCAAT TGTCTAGGCG AGGCTTTGAA TGAAGCTCGC
CAAAACTGCG CAGCAGTAGC TACTGAATTA GGGATCGAGC CCTAG
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| Protein sequence | MADRMEPILP GSYLGILGGG QLGRMFTQAA QAMGYKVCVL DPGSDSPAGS IVEKFIQAEY
TDSAALKEMA SLCASVSTEF ENVPAQALDE LESLGVFVAP RSSCVSLVQN RIAEKNFLAT
WKSETNIGPA PNFVIEHEAD IAHTPTNLFP GILKTARMGY DGKGQATVYS AKELSTAWNE
FGRVPCVLEK RMDLDFEVSA LVVRGYDDAV VAYPVSQNIH RDGILHTSTV PAPSLKPAQE
KKIVEAAKAL IRKIDYVGVL CVEFFVLKNG DIIANEIAPR PHNSGHYTMD ACVSSQFEQQ
VRAMARLPLG DTRQLAPVSM LNLLGDLWFE GSEDQPKEPA WNKVLAHPDA KLHLYGKSEP
RIGRKMGHIN CLGEALNEAR QNCAAVATEL GIEP
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