| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1524 |
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| Symbol | |
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| ID | 6183356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1328425 |
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| End bp | 1329300 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641672053 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_001798225 |
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| Protein GI | 171464112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0245031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTCTT ATATCCTTCG TTATCCAGCT TTGATGATCG CTCTATTTTG GTTTGCCAGC
CCCCTTACTG CTACCAATGA TCTAGGTCCA CTGGATATTC CCAAGACCGT TTCTTTCAGC
CTAGAGCGCA ATCAAATTCT TAAAGATGCC GTCAGCATTT CTGTAATAGA GATTGAGCCC
GGTCGCCCAG GCAAGCATGT TGCTAAAAAC ATTTTGAATT GGCGCTCTGA AGTGGCTATG
AACCCAGCTT CGACTATGAA GTTATTGACC ACCTTAAGTG GTTTGGATAT CTTGGGGCCG
CAATATCGTT GGCGCTCCAA TATTTATACC GACGGCATTA TTCGACAGGG GGTACTGAAG
GGTAATCTGT ATTTACAGGG AACTGGTGAC CCAAAGCTCG TACCCGAAGA ACTTGCCAAG
ATGATGAAAG ATCTTCAAGG TCTGGGTATT CAGAAGATTG ATGGCAATCT ATTCATTGAT
CGTAGCGCAT ATGCACCGAG CGTAATGGAG CACAACACCA TTGATGGTGA ATCCTTACGC
GCTTACAACG TACCTCCAGA TCCACTGTTC TATGCCTTTA GAACCCTTTC TTTTCAGTTG
AGTAAATCAC GCACTGCGGA CTTTATTGAT ATTAGCTATA CGCCTACACT ATCGCAATTG
AAGGTTGTCA ATCAAATGCA GTTGGTTGAT CGCTCCTGCG ATAACTGGAA AAACAATATT
CGTTTTAACT TAGATCCAGA GGGTATCAGC AGCACCGATC AATCCCTAAC AGCTCAGTTC
TCTGGCGCAT TTCCGAGTTC TTACAAAGGC GTGAATTTCA ACATCGTTGC TTTAGACGCC
AATACTTTTT TAACGCAAGG CTTTGCAGCA GCATAG
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| Protein sequence | MRSYILRYPA LMIALFWFAS PLTATNDLGP LDIPKTVSFS LERNQILKDA VSISVIEIEP
GRPGKHVAKN ILNWRSEVAM NPASTMKLLT TLSGLDILGP QYRWRSNIYT DGIIRQGVLK
GNLYLQGTGD PKLVPEELAK MMKDLQGLGI QKIDGNLFID RSAYAPSVME HNTIDGESLR
AYNVPPDPLF YAFRTLSFQL SKSRTADFID ISYTPTLSQL KVVNQMQLVD RSCDNWKNNI
RFNLDPEGIS STDQSLTAQF SGAFPSSYKG VNFNIVALDA NTFLTQGFAA A
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