Gene Pnec_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1515 
Symbol 
ID6183564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1320405 
End bp1320743 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID641672045 
Productputative transmembrane NAD(P) transhydrogenase transmembrane protein 
Protein accessionYP_001798217 
Protein GI171464104 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.406709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.638417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG CTGCCTTTCA AAGCATCCTC ACCGTTCAAA ACATTACTGT ATTTGTGTTG 
GCCATTTTTG TTGGCTACCA TGTAGTTTGG AACGTTACCC CTGCACTTCA TACGCCACTC
ATGGCGGTAA CTAATGCGAT CTCTGGGATC ATCATCGTCG GTGCATTACT CCAAACTGAA
GTAATTGGTG GTGATGAAAT TACTCTTACC AGCATTATTG GTGCAGTAGC GGTATTCCTC
GCATCAATTA ATATTTTTGG TGGCTTTATG GTCACCCGTC GCATGCTTGA GATGTTCAAG
AAAAAAGCCC CTAAGGCTGA TGCGGCTGGA ACCAAATAA
 
Protein sequence
MDLAAFQSIL TVQNITVFVL AIFVGYHVVW NVTPALHTPL MAVTNAISGI IIVGALLQTE 
VIGGDEITLT SIIGAVAVFL ASINIFGGFM VTRRMLEMFK KKAPKADAAG TK