| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1510 |
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| Symbol | |
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| ID | 6183399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1314438 |
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| End bp | 1315799 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672040 |
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| Product | Three-deoxy-D-manno-octulosonic-acid transferase domain protein |
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| Protein accession | YP_001798212 |
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| Protein GI | 171464099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.493604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTTAA CTACCAATTC AGAATACGGG GCGAAGCCCC GGGTCTGGTT TGCTGTTTAT
CAACTGCTGT GGCATCTCTT GTTGCCATTG GCATTTATTC GTTTAGCTTG GCGCGCTCGT
CATGCTTTCT CCTATTTGCA TCACATTCCA GAGCGGCTTG GCTTTGGTTA TAGCAAGCCT
ATTACTCAGG GCTCTATTTG GATTCATGCA GTATCCGTAG GAGAAACCCG TGCTGCTCAG
CCTTTAATTG AGGCCTATTT AGTTAGAGGG GAGTCGATTC TCCTCACTCA CATGACTTTG
AACGGGCGTC GTACTGGCAA ACAGTTATTC GCAAAAGCAA TAGCCTTTGG ACAAATTCGA
CAAGTCTATT TGCCGTACGA CATTTGTTGG GCGGTAGAGC ATTTCTTGAA GACTTTTAAG
CCAAGGCTTG GATTATTTAT GGAGACTGAA GCGTGGCCTA CAGTTGTCTT TCGCTGCAAA
GAAATTGGCT TACCTCTATT TCTAGTTAAT GCTCGTTTAT CAGAGCGAAG TGCGCGTCGT
GTAAATCGTT TTGGAAAGGC GGGGCGCGCT TTATTCCAAG CTTTTTCTGG GATCTTGGCA
CAAACGGAAT TTGATGCTCA GCGTTACTGC AGCTTAGGTG TTCTGAATGT GCAGATCGTC
GGTAATCTGA AATTTGATGT GCCGCTAGAT GAAGCTCTTG TAAAACAAGG CCAAGTTTGG
CGCCGTAATT TGCAGGCTAA CCATCGCCTA ATGGTATGTG CTGCTAGTAC GCGGGATGGC
GAAGAAGCCA TCATTCTGAA GGCGTGGAAA GATTTGCTCA TGAGTCATGC TTTTGAAGTC
GTTCCTTTGC TTTGTCTGGT GCCGCGCCAT CCAGAGCGCT TCACAGAAGT GGCCGATGCA
ATAAACAATG CCGGCTTTAG GTTTCGTAAG CGTAGCGAGT GGCCGGGTGT TCCAAGTGAC
TACGCTAGTT TAGATAATGT TTTGGGTGAT TCCATGGGCG AGATGCCAAT GTATTACAGC
GCATCAGACT TAGTGCTTAT GGGTGGAAGT CTATTGCCTT TTGGTGGTCA AAATCTCATT
GAAGCTTGCG CAGCAGGATG CCCAGTTTTA TTGGGCGAGC ATACGTATAA CTTTCAGCAG
GCTGCTTTAG ATGCGATTGA TAGCGGCGCC GCTATACGAA TCAAAGGCGA GCTACTATTA
ACCGAACCAA TCGCATTGAT GGAGTCTTTA AAAGAGCTGC TTTTAAGACC GACTGAACTT
GGGAGGATGA GTAAAGCAGC GAAGGCTTAC TCAGTGAAGC ATCAAGGTGC AACTAATAGA
ATCTTAGCTG CCCTTGATCA CCAAAGCGTT TCTCTGAAGT AG
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| Protein sequence | MSLTTNSEYG AKPRVWFAVY QLLWHLLLPL AFIRLAWRAR HAFSYLHHIP ERLGFGYSKP
ITQGSIWIHA VSVGETRAAQ PLIEAYLVRG ESILLTHMTL NGRRTGKQLF AKAIAFGQIR
QVYLPYDICW AVEHFLKTFK PRLGLFMETE AWPTVVFRCK EIGLPLFLVN ARLSERSARR
VNRFGKAGRA LFQAFSGILA QTEFDAQRYC SLGVLNVQIV GNLKFDVPLD EALVKQGQVW
RRNLQANHRL MVCAASTRDG EEAIILKAWK DLLMSHAFEV VPLLCLVPRH PERFTEVADA
INNAGFRFRK RSEWPGVPSD YASLDNVLGD SMGEMPMYYS ASDLVLMGGS LLPFGGQNLI
EACAAGCPVL LGEHTYNFQQ AALDAIDSGA AIRIKGELLL TEPIALMESL KELLLRPTEL
GRMSKAAKAY SVKHQGATNR ILAALDHQSV SLK
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