Gene Pnec_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1490 
Symbol 
ID6183836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1289858 
End bp1290661 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content48% 
IMG OID641672024 
ProductDNA repair protein RecN 
Protein accessionYP_001798196 
Protein GI171464083 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTAA CGCTACTTAC AAAAAATCGA TTAGACCCGG CTCGTCTTGC CCAAGTCGAA 
GAACGCATGC AAGCGTTGCA TAGTGCAGCC CAAAAATACC GTACCGAAAC AGATGATTTG
CCAAAACTTC TTTTAGAAAC ATCTGAGCAA CTAGATGCTT TAACGGCCTC GCAAAATATT
GAAGCGCTTC GCGAGCAAGT TCAGCAAGAA GAAGTGGCTT ATTTGAAATT GGCCAAGCAA
CTCTCACAAA AACGCACCAA GGCCGCAAAA GAACTGGGTG ATTTAGTAAC TAGTGCTATG
CAAGATTTAT CTATGGCGGG TGGGCGTTTA GAGATCGCAG TAACCCCGCT GGCTGAAGGT
GGATCACACG GTCTAGAGCA AATTGAATTT TTAGTTGCAG GTCATGCTGG CAGCACTCCT
CACTCACTTG CAAAAGTGGC TTCCGGAGGT GAATTGGCCC GGATTAGCTT AGCCATCAGC
GTCATTACTA GCAAAGCCTC ATTTACGCCA ACCCTCATAT TTGATGAGGT TGATGCTGGT
ATTGGTGGCG CAGTGGCTGA AACCGTTGGC AGGTTACTGC ATCAATTCCA CCAGATACTA
TGCATGACCC ATTTGCCGCA GGTAACCGCT CAGGGCAATC ATCACTTCAA AATTAGCAAG
TCACAAAGTG GTGAAAAAAC GGTTTCTCAA GTCCAGATTT TAGGCAGAGC TGAGCGAGTT
GAGGAAGTAA CTAGGATGCT TGGTGGCGCT ACCATTACCG ACACTACCCG CCGCCATGCC
CGCGAGTTGC TGGGGCAAAA CTGA
 
Protein sequence
MGLTLLTKNR LDPARLAQVE ERMQALHSAA QKYRTETDDL PKLLLETSEQ LDALTASQNI 
EALREQVQQE EVAYLKLAKQ LSQKRTKAAK ELGDLVTSAM QDLSMAGGRL EIAVTPLAEG
GSHGLEQIEF LVAGHAGSTP HSLAKVASGG ELARISLAIS VITSKASFTP TLIFDEVDAG
IGGAVAETVG RLLHQFHQIL CMTHLPQVTA QGNHHFKISK SQSGEKTVSQ VQILGRAERV
EEVTRMLGGA TITDTTRRHA RELLGQN