Gene Pnec_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1488 
Symbol 
ID6184116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1288069 
End bp1288974 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID641672022 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_001798194 
Protein GI171464081 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACC CATCCCCAAA TTCCACCAAG AAGGCATTTA GCCGGATTGC GCTTGTCGGC 
AAATTCCATG CTGACCGCAT TGATGAGCAC CTCAGGGACC TGGCTACCGT GGTTAAAAGC
CTTGGTTGCG AAGTCTTTCT GGAAGCGGCC ACAGCCCAAC ATTTGAGCTT AAAAGAATTT
CCCACCAAGA CTGCAGAAGA TTTTGCAGGG GCTATCGATT TAGTCATCGT TCTTGGGGGC
GATGGCACCA TGCTCGGAAT TGGTCGTCAA TTAGCAGGTA GCAACGTGCC ATTAGTCGGC
ATCAATATGG GTCGCCTCGG CTATATGACC GATATCCCAA TTCAGTCAGT ACAAGCCACT
CTTCCTAAAA TCATTACCGG CGAATATGAA GCGGATACCC GTACATTGCT TGATGCAGTA
GTTCTGCGTA ACAGCAAAGA AATCAATCGT ACACTTGCAC TAAATGATGT GGTGGTTAAT
CGCTCTGGAA TTTCTGGAAT GGTTGAGTTG GCTGTTCATG TCAACGGTTC GTTTATGTAT
AACCAAAGGT CAGATGGTTT GATCGTATCA ACCCCGACCG GCTCAACTGC TTACGCACTC
TCAGCCGGTG GACCCATTCT GCATCCACGC GTTGCAGGCA TCTTACTGGC CCCAATCGCA
CCCCATTCCC TCTCGAATCG CCCGATAGTA TTACCAGAAG ATTGCGTTAC CAGCATTGAG
GTAGTTGATG GTCGAGAAGT CATCGTCAAC TTTGATATGC AATCTCAAAC TGATTTGCAA
ACTGGTGACA AGATTGAAGT CCGCCAATCC GAGAAAACCA TCACCCTTTT GCATCCTCGC
AGTCATAGCG ACTACAAAAC CTTACGCGAG AAGCTGCACT GGAATGAGTA TCCATCGACA
TTCTGA
 
Protein sequence
MLNPSPNSTK KAFSRIALVG KFHADRIDEH LRDLATVVKS LGCEVFLEAA TAQHLSLKEF 
PTKTAEDFAG AIDLVIVLGG DGTMLGIGRQ LAGSNVPLVG INMGRLGYMT DIPIQSVQAT
LPKIITGEYE ADTRTLLDAV VLRNSKEINR TLALNDVVVN RSGISGMVEL AVHVNGSFMY
NQRSDGLIVS TPTGSTAYAL SAGGPILHPR VAGILLAPIA PHSLSNRPIV LPEDCVTSIE
VVDGREVIVN FDMQSQTDLQ TGDKIEVRQS EKTITLLHPR SHSDYKTLRE KLHWNEYPST
F