| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1474 |
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| Symbol | |
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| ID | 6184411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1273822 |
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| End bp | 1274466 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672009 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_001798181 |
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| Protein GI | 171464068 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCA TTTTGCAATT AGGCGATTTA TTGCTGCATA TTGATAAACA TCTCGATGTA
GTGATTCAGC AATATGGCCC TTGGGCTTAC GGTCTTTTGT TTGCAATTGT TTTTGCAGAA
ACGGGTTTGG TAGTTGTCCC GTTCTTGCCC GGAGATTCAC TCTTATTTAT TGCGGGCGCC
TATTGCGCTA CGGAGCATTT CAATATTTGG ACCTTGTGTA TTGGTTTGCT CATTGCGGCA
GTTGCTGGCA ATACAGTAAA TTATTTCATT GGCCGCTGGA TTGGGAAGAG AGTCTTTAGT
AGTAAGTTTC GCTGGATTGA TCAAGGGGCT CTACTCAAAA CCCATGCCTT TTATGAAAAA
CATGGTGGCA AGACCATTAT TGTTGCGCGC TTTTTGCCCA TCATTAGAAC CTTTGCGCCA
TTTGTTGCCG GCGTTTCAGA GATGAACTTT TCACGCTTTC AGCTATTTAA CGTTACCGGC
GCTCTGCTTT GGGTATTCGG TTTAGTTATT GCGGGATATT TCTTTGGAAA TATTCCAGTG
ATTCGTCAGA ATCTGAATGT CATCGTGCTA GTAGGTATCG GAGCAGCGGG TATACCGGTG
GTCTTCGCAG CGATCTATAA GATTTTTCAA CGCAAGAAAA ACTAA
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| Protein sequence | MDTILQLGDL LLHIDKHLDV VIQQYGPWAY GLLFAIVFAE TGLVVVPFLP GDSLLFIAGA
YCATEHFNIW TLCIGLLIAA VAGNTVNYFI GRWIGKRVFS SKFRWIDQGA LLKTHAFYEK
HGGKTIIVAR FLPIIRTFAP FVAGVSEMNF SRFQLFNVTG ALLWVFGLVI AGYFFGNIPV
IRQNLNVIVL VGIGAAGIPV VFAAIYKIFQ RKKN
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