| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1472 |
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| Symbol | |
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| ID | 6182990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1271468 |
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| End bp | 1273021 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641672007 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001798179 |
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| Protein GI | 171464066 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGC TTTCTACTGC CGCTAAGGTT AGCTCCCTAA CCATGCTGTC CCGGATTACT
GGCCTACTCC GGGAGACTCT AATTGCCCGT AGTTTCGGGG CTTCCGAGTG GACGGACGCC
TTTAATGTGG CTTTTAGGCT ACCCAATTTG CTGCGTCGGC TGTTTGCTGA AGGAGCCTTT
TCCCAGGCTT TTGTGCCTAT TTTGGGAGAA ATCTCCAGTA ATGGGGACCA AAAACAGGCC
AAAATCCTCA TAAATGCGGT CGTCACCCTC TTATTTTGGG CTTTGCTGCT CACGGTATTG
GCGGGTGTCA TTGGCGCCCC AGTGCTCATT TTGGCCATTG CCACCGGATT CAAAGGAGGT
CCAGCCTATG ACGCCAGCGT CGTCATGACG CACATCATGT TTCCCTATAT TGGCCTCATT
TCCATAGTTT CGCTGTCAGC AGGAATTCTC AATACATTCC AGCGCTTTGC TATTCCAGCT
TTTACTCCAG TTTTATTAAA TCTAGCCCTC ATTGTTAGCG CCCTATTTTT GGCGCCTTAC
TTAGAGCAAC CGATCTATGC CTTAAGTATC GGCGTTCTGC TCGGCGGAGT TTTACAGCTA
GCCATTCAAA TTCCGGCTCT CTCCCGCCTT GGGCTTTTGC CTCGCATTGG TTTATTGCCG
GGAGCAATTA AAGCGGCCGC CTCCAACCCA GATGCAAGAC GAGTCTTGCG CTTGATGGGG
CCAGCGGTTT TCGCTGTATC TGTTGCACAA ATCTCTCTGA TCATTAACAC CAACATCGCC
TCACGACTAC AAGCAGGGAG CATGTCTTGG TTATCTTATG CAGACCGCTT GATGGAGTTT
CCAACTGCAC TACTGGGTGT TGCTCTTGGC ACAGTTCTTT TGCCAAGCCT GAGTAAAGCA
AATGCCAAGA AGGATTTGGC TCACGCTGGC GAACTACTCA TCTGGGGATT GCAATTGACC
TTCTTGCTGG CTGCACCTTG TGCGCTTGCG CTCTTTATTT TTGGGGAACC TCTTGCAGCG
GTGCTCTATC ACTACGGAAA ATTTAATGCA CTTGATGTGT TGATGACTCA ACGCGCACTC
GCGGCTTATG GCGTTGGTTT AATTGGACTA ATTCTGGTAA AAATCCTAGC ACCCGGCTTT
TACTCTCGCC AAGATATTCG CACACCAGTC AAAATTGGCT TGTTTGTTTT AGTGGCCACT
CAATTGGCCA ACTTGGTATT TGTCCCCTGG CTTGGACACG CTGGGCTCGC ACTCTCGGTG
GGATCGGGCG CCTGCCTTAA TGCGGCCTTA CTATGGGTGG GTCTCCATCG ACGCGGCGCT
TTACCTAATT CAGCCTGGAT GAAATACTTA GGGCAACTGC TATTAGCCCT TATTCCCTTT
GCAGCAGTCC TTTTTTACGC CGCAGGAGCA CATAATTGGT TCGCCTTGCA AGCTGAACCA
TGGCTTCGCG TTGGTCTGCT GGCCGCATGG TTAGCAGTTG CCGCGATTGT TTACTTTGCA
TCCTTGGGTT TGATTGGAAT TCGCTGGCAA AAATTCTTGC GTCATGCAAA ATAG
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| Protein sequence | MNLLSTAAKV SSLTMLSRIT GLLRETLIAR SFGASEWTDA FNVAFRLPNL LRRLFAEGAF
SQAFVPILGE ISSNGDQKQA KILINAVVTL LFWALLLTVL AGVIGAPVLI LAIATGFKGG
PAYDASVVMT HIMFPYIGLI SIVSLSAGIL NTFQRFAIPA FTPVLLNLAL IVSALFLAPY
LEQPIYALSI GVLLGGVLQL AIQIPALSRL GLLPRIGLLP GAIKAAASNP DARRVLRLMG
PAVFAVSVAQ ISLIINTNIA SRLQAGSMSW LSYADRLMEF PTALLGVALG TVLLPSLSKA
NAKKDLAHAG ELLIWGLQLT FLLAAPCALA LFIFGEPLAA VLYHYGKFNA LDVLMTQRAL
AAYGVGLIGL ILVKILAPGF YSRQDIRTPV KIGLFVLVAT QLANLVFVPW LGHAGLALSV
GSGACLNAAL LWVGLHRRGA LPNSAWMKYL GQLLLALIPF AAVLFYAAGA HNWFALQAEP
WLRVGLLAAW LAVAAIVYFA SLGLIGIRWQ KFLRHAK
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