Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1472 |
Symbol | |
ID | 6182990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1271468 |
End bp | 1273021 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641672007 |
Product | integral membrane protein MviN |
Protein accession | YP_001798179 |
Protein GI | 171464066 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC TTTCTACTGC CGCTAAGGTT AGCTCCCTAA CCATGCTGTC CCGGATTACT GGCCTACTCC GGGAGACTCT AATTGCCCGT AGTTTCGGGG CTTCCGAGTG GACGGACGCC TTTAATGTGG CTTTTAGGCT ACCCAATTTG CTGCGTCGGC TGTTTGCTGA AGGAGCCTTT TCCCAGGCTT TTGTGCCTAT TTTGGGAGAA ATCTCCAGTA ATGGGGACCA AAAACAGGCC AAAATCCTCA TAAATGCGGT CGTCACCCTC TTATTTTGGG CTTTGCTGCT CACGGTATTG GCGGGTGTCA TTGGCGCCCC AGTGCTCATT TTGGCCATTG CCACCGGATT CAAAGGAGGT CCAGCCTATG ACGCCAGCGT CGTCATGACG CACATCATGT TTCCCTATAT TGGCCTCATT TCCATAGTTT CGCTGTCAGC AGGAATTCTC AATACATTCC AGCGCTTTGC TATTCCAGCT TTTACTCCAG TTTTATTAAA TCTAGCCCTC ATTGTTAGCG CCCTATTTTT GGCGCCTTAC TTAGAGCAAC CGATCTATGC CTTAAGTATC GGCGTTCTGC TCGGCGGAGT TTTACAGCTA GCCATTCAAA TTCCGGCTCT CTCCCGCCTT GGGCTTTTGC CTCGCATTGG TTTATTGCCG GGAGCAATTA AAGCGGCCGC CTCCAACCCA GATGCAAGAC GAGTCTTGCG CTTGATGGGG CCAGCGGTTT TCGCTGTATC TGTTGCACAA ATCTCTCTGA TCATTAACAC CAACATCGCC TCACGACTAC AAGCAGGGAG CATGTCTTGG TTATCTTATG CAGACCGCTT GATGGAGTTT CCAACTGCAC TACTGGGTGT TGCTCTTGGC ACAGTTCTTT TGCCAAGCCT GAGTAAAGCA AATGCCAAGA AGGATTTGGC TCACGCTGGC GAACTACTCA TCTGGGGATT GCAATTGACC TTCTTGCTGG CTGCACCTTG TGCGCTTGCG CTCTTTATTT TTGGGGAACC TCTTGCAGCG GTGCTCTATC ACTACGGAAA ATTTAATGCA CTTGATGTGT TGATGACTCA ACGCGCACTC GCGGCTTATG GCGTTGGTTT AATTGGACTA ATTCTGGTAA AAATCCTAGC ACCCGGCTTT TACTCTCGCC AAGATATTCG CACACCAGTC AAAATTGGCT TGTTTGTTTT AGTGGCCACT CAATTGGCCA ACTTGGTATT TGTCCCCTGG CTTGGACACG CTGGGCTCGC ACTCTCGGTG GGATCGGGCG CCTGCCTTAA TGCGGCCTTA CTATGGGTGG GTCTCCATCG ACGCGGCGCT TTACCTAATT CAGCCTGGAT GAAATACTTA GGGCAACTGC TATTAGCCCT TATTCCCTTT GCAGCAGTCC TTTTTTACGC CGCAGGAGCA CATAATTGGT TCGCCTTGCA AGCTGAACCA TGGCTTCGCG TTGGTCTGCT GGCCGCATGG TTAGCAGTTG CCGCGATTGT TTACTTTGCA TCCTTGGGTT TGATTGGAAT TCGCTGGCAA AAATTCTTGC GTCATGCAAA ATAG
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Protein sequence | MNLLSTAAKV SSLTMLSRIT GLLRETLIAR SFGASEWTDA FNVAFRLPNL LRRLFAEGAF SQAFVPILGE ISSNGDQKQA KILINAVVTL LFWALLLTVL AGVIGAPVLI LAIATGFKGG PAYDASVVMT HIMFPYIGLI SIVSLSAGIL NTFQRFAIPA FTPVLLNLAL IVSALFLAPY LEQPIYALSI GVLLGGVLQL AIQIPALSRL GLLPRIGLLP GAIKAAASNP DARRVLRLMG PAVFAVSVAQ ISLIINTNIA SRLQAGSMSW LSYADRLMEF PTALLGVALG TVLLPSLSKA NAKKDLAHAG ELLIWGLQLT FLLAAPCALA LFIFGEPLAA VLYHYGKFNA LDVLMTQRAL AAYGVGLIGL ILVKILAPGF YSRQDIRTPV KIGLFVLVAT QLANLVFVPW LGHAGLALSV GSGACLNAAL LWVGLHRRGA LPNSAWMKYL GQLLLALIPF AAVLFYAAGA HNWFALQAEP WLRVGLLAAW LAVAAIVYFA SLGLIGIRWQ KFLRHAK
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