| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1471 |
|---|
| Symbol | rpsT |
|---|
| ID | 6184315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1271057 |
|---|
| End bp | 1271323 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641672006 |
|---|
| Product | 30S ribosomal protein S20 |
|---|
| Protein accession | YP_001798178 |
|---|
| Protein GI | 171464065 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0268] Ribosomal protein S20 |
|---|
| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 72 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATA CAGTACAAGC GCGCAAGCGT GCACGCCAAG CAGTAAAACA AAACGAACAT
AACTCCAGCT TGCGTTCAAA GCTCCGCACT TCCATTAAGG CAGTTCGTAA AGCGATTGAA
GCTGGTGACA AAGCTGCTGC AGCGAAAGTG TTCGCAGCAA CTCAATCAAC AATTGACAAG
ATTGCTGACA AAAAGATTGC GCACAAAAAT ACTGCTGCTC GTCAGAAGTC GCGCTTGTCA
GCAGCTATCA AGGCGATGGC AGCGTAA
|
|---|
| Protein sequence | MANTVQARKR ARQAVKQNEH NSSLRSKLRT SIKAVRKAIE AGDKAAAAKV FAATQSTIDK
IADKKIAHKN TAARQKSRLS AAIKAMAA
|
|---|
| |