| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1459 |
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| Symbol | lspA |
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| ID | 6184391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1261625 |
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| End bp | 1262116 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641671995 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001798167 |
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| Protein GI | 171464054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.419525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAGTC TTTCTCTGCT TCGTTATCTA GCAATTGCAA TCATCGTGCT ATTGCTAGAT
CAACTCAGCA AGTGGTCAGC CCTAAGCAAT TTGCAAATGG GTATTCCAGA ACCAGTTCTG
CCATTTATGA ACTGGTTGCT TCTCTTTAAC CCGGGAACGG CATTTTCATT TCTGGCACAA
GGCTCAGGCT GGCAACGTTG GTTTTTCACC GTTCTTGGTC TAGCAGCATC CATCTACATT
ATTTGGATGC TCTACAAAAG CCAAAGCGAC AAATTACTCT GTATAGCCCT GAGCTTAATC
TTGGGTGGTG CACTCGGTAA CGTCTTAGAT CGCGTAATGT ATGGCGCTGT AGTCGACTTC
ATTGACCTTC ATTACGCCAA TTGGCATTGG CCGGCATTCA ATATTGCAGA TAGCGCGATC
TGCGTTGGAG CCGCCCTCAT TATTTGGGGC GAATTACGCA AGTCATTTGG CAAATCTGCC
CAATCCCATT AA
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| Protein sequence | MKSLSLLRYL AIAIIVLLLD QLSKWSALSN LQMGIPEPVL PFMNWLLLFN PGTAFSFLAQ
GSGWQRWFFT VLGLAASIYI IWMLYKSQSD KLLCIALSLI LGGALGNVLD RVMYGAVVDF
IDLHYANWHW PAFNIADSAI CVGAALIIWG ELRKSFGKSA QSH
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