| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1455 |
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| Symbol | |
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| ID | 6184509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1255585 |
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| End bp | 1257144 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671992 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_001798164 |
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| Protein GI | 171464051 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.653604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG AACGTCCACC CCGCAGACCT GGTAGCAGAT TAGCTCCCCA TAAAAGTTAT
GCGACGAAAT CAAAAGATCC TTTGCGTCGT CCAGAGCGTC GCAATGCCAG TGGCAACTTG
ATTGCGCCTG AAGGTCAAAA GAATTTCTCG AATGCAAAAG CATTGCCCCA ACATGCAATT
CATCTAGAGC GTCTCTTGCC CGAGTTGCTT AGTTTTGAGC AGCCAGCAGA TCGAGTGGTG
AGCCGTTATT TTCGCTCTGA ACCGAAACTC GGAAATCGTG ATCGCGCTTT GATTGCTGAA
AGCGCATTTG CAATTTTGCG TCGTAAAAAT GAGTTCTCTC AATTTGCCTC AAGTGGTGAG
GGATCACAAG CTAGACGCCT AGCCCTATTG GGTTTGCTGT CTGCTCTGTC TGAAGGTGGC
TTGGGTTCTG CCAATCGCGC AGAAAGTGCG ATTGCTGACT TGGCGCATGT GCTTAAGCAT
GGTGAATACG AATGGCTGCA ACGTTTTGCT ACTGTTGATC CAGCGGCCTT AAATCCCCTG
GTTTGTAACA ATTTGCCAGA GTGGTTGTGG GATGCATTTG GTCAATATCC TGGTGAAGAT
ACTCGTGAAG AGCTTGCGAA ATCTTTAATG CATCCAGCAC TTTTAGATTT ACGTGCGAAC
ACCATGAAAA CTAATCGCGA AGAATTGCTG GCGCAGATGA ATGCATTGGG TGGTCGCTAT
CAAGCAATTC CAACTCCATA TGCTCCAGAT GGTGTCCGCA TTATGGGTAA ACCAGCTCTG
CAAAATACTC CCGGTTTTAA AGCGGGTATG TTTGAGGTGC AGGATGAAGG CAGTCAGCTA
TTGGCATATT TACTTGCGCC CAAGCGTGGC GAAATGGTTG TGGACTTTTG TGCTGGTGCT
GGCGGCAAGA CCCTGGCGAT CGGAGTTATC ATGCGCTCCA CAGGGCGCTT ATACGCTTTA
GATACATCTG AGCGTCGCTT GGCAAATTTG AAGCCAAGGC AGGCCCGTAG CGGCCTTTCT
AACGTTCATC CCGTGTGGAT TGATAGTGAG AACGATGCCA AGATCAAACG CTTGGCAGGA
AAAATCGACC GTGTACTCGT GGATGCTCCT TGTAGTGGCA TGGGTACTTT GCGCCGCAAT
CCTGATTTGA AGTGGCGCCA GACCCAAGCT GGCGTCTTGG AGCTAAACCA GAAGCAAATG
AGTATCCTAA ACTCTGCTGC ACGCCTATTA AAGCCCGGTG GACGCTTGGT TTATGCAACC
TGCAGTCTGT TGCCCCAAGA GAATCAGGCG ATAGCCGAGG ATTTTCTGGC AAAACACCCT
CAATTTGAGG TCGTTCCAGC GGCAGAAGTT CTTAAGTCAT TGTTTCCAAA GGAAAAATTA
CCTTTAGGAT GTAGTCTCGA CAATCCCTGG TGGCAGTTAT GGCCACACAT TCACGGGACA
GATGGTTTTT TTGGAGCAGT TTTTCAAAAG AAGGTGGTCG GCCCAGTTCC CGAGTCTGAA
AAAGACGATC AAAAAGAGAC TAAGGTTAAA AACAAGAAGA CCCCTAAAGA ACTAAAATAG
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| Protein sequence | MSAERPPRRP GSRLAPHKSY ATKSKDPLRR PERRNASGNL IAPEGQKNFS NAKALPQHAI
HLERLLPELL SFEQPADRVV SRYFRSEPKL GNRDRALIAE SAFAILRRKN EFSQFASSGE
GSQARRLALL GLLSALSEGG LGSANRAESA IADLAHVLKH GEYEWLQRFA TVDPAALNPL
VCNNLPEWLW DAFGQYPGED TREELAKSLM HPALLDLRAN TMKTNREELL AQMNALGGRY
QAIPTPYAPD GVRIMGKPAL QNTPGFKAGM FEVQDEGSQL LAYLLAPKRG EMVVDFCAGA
GGKTLAIGVI MRSTGRLYAL DTSERRLANL KPRQARSGLS NVHPVWIDSE NDAKIKRLAG
KIDRVLVDAP CSGMGTLRRN PDLKWRQTQA GVLELNQKQM SILNSAARLL KPGGRLVYAT
CSLLPQENQA IAEDFLAKHP QFEVVPAAEV LKSLFPKEKL PLGCSLDNPW WQLWPHIHGT
DGFFGAVFQK KVVGPVPESE KDDQKETKVK NKKTPKELK
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