| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1439 |
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| Symbol | |
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| ID | 6183543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1240380 |
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| End bp | 1241882 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641671979 |
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| Product | protein of unknown function DUF112 transmembrane |
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| Protein accession | YP_001798151 |
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| Protein GI | 171464038 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAT TTGTTAACTT AGCTCTCGGT TTTGATACCG CATTCACATT ACAAAATCTT
TTGTACTGCC TTATCGGCTG TATTTTGGGA ACCTTAATTG GCGTATTACC AGGCCTAGGC
CCAATCGCAA CGATAGCGAT GTTATTGCCT GCTACATATG CTTTGCCTCC AATTGCCGCC
TTGATTATGT TGGCCGGTAT TTACTACGGA TCACAATATG GCGGTTCTAC AACAGCGATT
CTGCTAAATA TCCCGGGCGA AACGTCGTCG GTGGTAACGG CGATTGATGG CTACCAAATG
GCTCGAAATG GCCGCGCTGG TGTCGCCCTG TTCACCGCCG GCATGGGCTC ATTCTTTGCA
GGTTGCGTAG CAACTTTAGT GTTAGCTGCT TTTGCTGCAC CACTTTCACA ACTCGCATTT
AAGTTCGGTC CTACCGAATA CTTCTCGCTG ATGGTTTTAG GCTTGATTGG TGCTGTTGTA
CTGGCATCAG GCTCCTTGAT CAAGGCGATT GGCATGATCA TCCTGGGCCT CTTAATGGGC
TTGATTGGTA CTGACGTGAA TTCTGGTGTT TCTCGTTATG CGTTTGACAT TCCTGAGTTG
AGTGACGGTA TCGGCTTCGT GGCCGTTGCT ATGGGCGTGT TCGGTTTCGC AGAAATCATG
GGTAACCTTG AGAAATCTGG CGAAGATGAA GGCTTCCTCA ACAAACTCAA TAGCATGGTG
CCCACCAAAA ATGATGTGAA GCGCATGATT CCATCCATCT TGCGCGGCAC CACTATCGGC
TCCATTCTGG GCATCTTGCC TGGTGGTGGC GCAGCTTTGG CCGCCTTTGG CGCTTACTCA
GTAGAGAAAA AATCCTCTAA GCACAGCAAT GAGTTCGGCA AAGGTGCGAT TGAGGGTGTC
GCCGGTCCTG AAGCAGCAAA TAATGCTGCC GCTCAAACAT CATTTATTCC TTTGCTCACA
TTAGGCATCC CGCCAAATGC AGTGATGGCT TTAATGGTTG GCGCGATGAC CATCCACAAT
ATTCAACCTG GCCCACAGGT AATGACCAGC AACCCAGCTT TGTTCTGGGG TCTGATCGCC
TCCATGTGGA TTGGTAACGT GATGTTGATT CTCTTGAACT TGCCTTTGAT TGGTATCTGG
GTCAAGCTCC TGAAGATTCC TTATCGCTTC CTCTATCCAG CAATTTTGGT GTTCTGCTGT
ATTGGTGTGT ACACCGTGAA CAACACTGTA TTTGATGTAT ATGTGACTGC AGGCTTTGGC
TTGATTGGTT ACCTATTCTT CAAACTCGGT TGCGAACCCC CTCCATTGCT TTTAGGCTTC
GTACTTGGGC CAATGATGGA AGAGAACTTC CGCCGTGCAT TATTGCTGTC ACGTGGCGAC
TTCTCCACCT TTGTAACTCG CCCACTTTCA TTGGGTTTGC TGATTGCAGC AGCCCTCTTG
GTAGTGATCG TGGCGCTTCC AACAGTGAAG AAGACTCGCG AAGAAGCATT CGTGGAAGAT
TAA
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| Protein sequence | MDLFVNLALG FDTAFTLQNL LYCLIGCILG TLIGVLPGLG PIATIAMLLP ATYALPPIAA
LIMLAGIYYG SQYGGSTTAI LLNIPGETSS VVTAIDGYQM ARNGRAGVAL FTAGMGSFFA
GCVATLVLAA FAAPLSQLAF KFGPTEYFSL MVLGLIGAVV LASGSLIKAI GMIILGLLMG
LIGTDVNSGV SRYAFDIPEL SDGIGFVAVA MGVFGFAEIM GNLEKSGEDE GFLNKLNSMV
PTKNDVKRMI PSILRGTTIG SILGILPGGG AALAAFGAYS VEKKSSKHSN EFGKGAIEGV
AGPEAANNAA AQTSFIPLLT LGIPPNAVMA LMVGAMTIHN IQPGPQVMTS NPALFWGLIA
SMWIGNVMLI LLNLPLIGIW VKLLKIPYRF LYPAILVFCC IGVYTVNNTV FDVYVTAGFG
LIGYLFFKLG CEPPPLLLGF VLGPMMEENF RRALLLSRGD FSTFVTRPLS LGLLIAAALL
VVIVALPTVK KTREEAFVED
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