Gene Pnec_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1432 
Symbol 
ID6183018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1229863 
End bp1230642 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content46% 
IMG OID641671972 
Productputative transmembrane protein 
Protein accessionYP_001798144 
Protein GI171464031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.634697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA ATTACGTAGC GCCAAAAGAA GGCTACACCT GGATTAGACA AGGTATTTGG 
CTCTTTAAGC AAAATCCTTT GGGATTCTTA ATGCTGGTCT TTATGTACGT ATTTGCCGCG 
CAACTGGCAG TCATCATCCC CGTCATCGGC GTTTTTGCCG TGCTACTCCT GACGCCAACT 
CTATCGGTAG GATTTATGAC TGCCTGCCGC CAGGCGATTC AAAAAGAACG TATTAAACCT 
TCAGTCTACA TAGTGGCTTT ACAAGCTGGC CCTATTGTTC GCAAAAGAAT TCTGCAGCTT 
GGCCTGGTAT ATGCCGGCAT GATTTTGTTG CTTAGTTTTA TCTTAAGTCT CTTAGTCGAT 
TTTGAATTAC TGCTTCCCTT GATGATCAGC GATAAACCCA TTACTCCTGA AGCGCTTCGC 
CAAGTCTATT TGGTGCTTTT CTTTGGCGCG ACGCTGTATG TTCCGGTGGC AATGTTGGTG 
TGGTTCTCAC CGATTTTAAT TGCTTGGGCT GATATGCCCG TTCCTCAAGC TTTATTCTCC 
AGTGCCTTGG CGTGCTGGGC CAATAAGGCC GCATTCTTTT TGTATCTCTC AATTTGGAGT 
GCGATTCTGA TTGCCATTCC ACTAACGGTT GGCATGATCT TTGATGCCCT CGATTTAGGG 
CAGGCAGCCT CCTTCATCAT TGCACCCATA TCTATGGCAA GCTTGACAAT CATGCACTGC 
TCTTTTTATG CCACCTGGAA GGCCTGCTTT ACCGAAGGCG AAATAATTCC TTCCACTTAA
 
Protein sequence
MKLNYVAPKE GYTWIRQGIW LFKQNPLGFL MLVFMYVFAA QLAVIIPVIG VFAVLLLTPT 
LSVGFMTACR QAIQKERIKP SVYIVALQAG PIVRKRILQL GLVYAGMILL LSFILSLLVD 
FELLLPLMIS DKPITPEALR QVYLVLFFGA TLYVPVAMLV WFSPILIAWA DMPVPQALFS 
SALACWANKA AFFLYLSIWS AILIAIPLTV GMIFDALDLG QAASFIIAPI SMASLTIMHC 
SFYATWKACF TEGEIIPST