Gene Pnec_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1430 
Symbol 
ID6183854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand+ 
Start bp1228463 
End bp1228870 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID641671970 
Productputative transmembrane protein 
Protein accessionYP_001798142 
Protein GI171464029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.827032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTATT TAACGAACTT AATTAGCCAC TCAATAAATC AAACCTTGGT TCTAACAAGC 
TTTTTCGTGG TTTTTGGACT CATTGGTGCC ACTTCAGCCC AAGCTCAGAA TAACAGCCAG 
GCACTAAGCC CATCAGAATT AAACCGTATC AATAACCAGC CGATAGCCCC TTCCGTGAGC 
GCGACTGGTG CGATGAATTC TCCCGAGCAG CGCAAACCCA ACTTTCAGTA CAAAGATAAA 
AACGGCACTA CTGTTACCGA ATATAAGGAT GTAAACGCTC CAACCCAGGT CGACGTAAAA 
ACACCGTACA CCAGTTATGA AATGGCACCC CCTACATCAG TAATGCCTGG ACCACCAAAA 
GAGACGGATC TAATTAGCGT TCCAAGTATT AGCATCCCGC TTAGATAA
 
Protein sequence
MHYLTNLISH SINQTLVLTS FFVVFGLIGA TSAQAQNNSQ ALSPSELNRI NNQPIAPSVS 
ATGAMNSPEQ RKPNFQYKDK NGTTVTEYKD VNAPTQVDVK TPYTSYEMAP PTSVMPGPPK 
ETDLISVPSI SIPLR