| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1429 |
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| Symbol | |
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| ID | 6183180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1225553 |
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| End bp | 1228381 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671969 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001798141 |
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| Protein GI | 171464028 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC ATAGACTCTT GTTGGTAGAC GGTTCTAGTT ACCTCTATCG TGCCTTCCAT
GCCATGCCAG ACCTCAGAAA CGGGGCTGGA GAGCCTACTG GAGCTATTTA TGGCATGGTA
AATATGATGC GCCGGACTAG ATCTGAGCTC AAAGCCGACC ATATAGCCTG TGTTTTTGAC
GCCAAGGGCA AGACCTTTCG CGATGAAATG TATTCTGAAT ACAAGGCGCA TCGCTCCCCG
ATGCCGGAAG ATTTGGTCAA GCAGATAGAG CCCATTCATG CCATGGTCAA AGCGTTGGGT
TGGCCAGTAT TGATGGTCGG TGGTGTTGAG GCGGATGACG TTATTGGGAC TTTGGCTTGT
CAAGCAACAC AAGCAGGTTG GGAAACCATC ATTTCCACCG ACGATAAAGA TTTGGCGCAA
TTGGTAAATT CTTCAGTCAC CCTCATAAAC ACAATGACTA ATGAAAAGTT GGATATTGAG
GGTGTTAAAG AAAAGTTTGG CGTGCCACCC GAGTTAATAG TGGATTATTT ATCCATCATC
GGCGATGCCG TAGATAACGT ACCTGGTGTT CCTAAGGCGG GCCCTAAGAC AGCAAATAAA
TGGTTAGCAG AATTTGGCAG TCTCGATAAC TTGATGGCCA ATGCTGATCA GGTGAAAGGT
GTTGTTGGCG AAAATCTGCG TGCCTCCCTC GATTGGTTGC CACAGGCACA CCAATTGATC
ACAGTAAAAA CAGATTGTGA TTTATCGCCA CACTTGCCTG GCTTAGATGA TTTGCATGCG
AAGTCTGAAG ATGCACCCTT GCTGCGTGAA TTATTTGAGC GTTACGCATT TAAGACTTGG
TTACGCGATG TAGAAAAACA GCTTACAAGT CCAGCGGATA AGGCTTCAGA GGTGGTGACA
TTTGATTTAG CGGGCAGTCC ACTCACCCCT TCTGAGCGTG GATTTGATGA AGAAAAAAAG
ACTCGTGTGA TTGTGAGCGC ACCAACAAAA AATTTATCGC AAGAAACTCG TGACTCTCAA
GATACAATCG AGCGACGGTA TGAATGCATC GTTGATATAG TTGGTTTAGA AAAATGGTTG
AAAAAAATTG AGTCTTCTCA ATTGACTGCG GTTGACACAG AAACTACGAG CTTAGATGCG
TTTGCAGCAG AACTTGTTGG TATTTCTTTG TCGGTGAAGC CGGGTGAGGC TTGCTACATT
CCGGTTGCAC ATCGTAATGG TGAGGCGCAA CTTGATCGCG ATTTGGTTCT GGCGCGTATG
AAGTCTTGGT TGGAGAGTGC AACGCATTTA AAGGTGGGGC AAAACCTCAA GTACGACTCC
CATATCTTTG CAAACTATGG CATCACATTA AAAGGGGTTG TATTCGATAC CTTGCTTGAA
TCTTATGTCC TTGAATCGCA TCTGCCGCAC AACATGGATA GTTTGGCTGA GCGCCATCTG
GGCATGAAAA CCATTCGCTA CGAAGAGGTG TGCGGAAAAG GGGTTCATCA GATTGGTTTT
GACCAGGTAG ATCTGAAGAT TGCGACTGAC TACGCCGCCG AAGATGCTGA CATTACCCTG
CGCCTTCATC TAGAGCTCTG GCCCCAGATT CAGGAGAGTC CGGGCCTACT TTACGTCTAT
GAGAAGGTAG AAATGCCCGC TATGCGTGTG CTTGGCATCA TGGAGCGTAA CGGTATTCGG
ATCGATTCTG CGTTGCTAGC CAAACAGGGT CAGCAGGTTG GTAAACGTCT TTTGGAGCTT
GAGGGTGAAA TCCATAAGCT GGCAGGTCAG CCGTTCAATA TTCAGTCACC CAAGCAAATC
GCCGAAATTT TGTTTGGCCA ACTTGAGTTA CCGGTGATTA AAAAGACGCC ATCTGGCGCG
CCATCTACGG ATGAAGAAGT GTTGCAGAAG TTGGCTGAGG ACTACCCGCT TCCCGCACGT
ATTTTGGATT ACCGCAGTTT GGCAAAGCTG ATGTCGACCT ATATCGAAAA GCTGCCGCGT
ATGGCTGATC CTAAAACGGG TCGAGTCCAT ACTAACTTTT CGCAAGCTAC TGCCGTTACT
GGCCGCCTAG CTTCAAGTGA TCCGAACTTA CAAAATATTC CTGTGCGCAC CGAAGAAGGT
AGACGCATTC GGGAGGCATT TATTCCAGCG GAAGGTTGCA AGCTATTATC AGCTGACTAC
TCTCAAATTG AGCTACGCAT CATGGCGCAT ATCGCCGAAG ATGAAAATCT CTTAACTGCT
TTTAGAGATG GTAAGGATGT GCACCAGGCT ACTGCAGCAG AAATCTTTGG CGTACCTTTG
GATGATGTGA GTTCAGAGCA ACGTCGTTAT GCCAAGGTAA TTAACTTTGG ACTCATTTAC
GGCATGAGTG CTTTTGGTTT GGCGGGTAAC TTAGGTATTG AGTGCTCAGC CGCGCAAAAT
TACATTGCTA AATACTTTGA TCGATACCCG GGGGTTGCTC AATACATGGA GCGCACTCGT
CTCGAAGCAA GAGAGAATGG TTATGTAGAG ACTGTCTTTG GCCGCCGTCT TTGGTCGCCT
GAAATAAAGG GCTCTAATGG ACCTCGTCGC CAAGGTGCAG AGCGCGCGGC AATTAATGCT
CCAATGCAAG GAACTGCTGC AGACCTAATT AAATTAGCCA TGATTGCCGT TGAGGATTGG
TTTGAAAAGG AGCAGTTAAA AACCAAAATG CTGCTTCAGG TGCATGATGA ATTGGTCTTT
GATGTTCCTT TAGATGAGAT TGAATTGCTG CAGGCTAAGC TGCCCAATTT GATGTGCCAT
GTAGCTCAAT TAAAGGTGCC CTTGGCGGTT AGTATTGGGA TTGGCGATAA TTGGGAAGAG
GCGCACTAA
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| Protein sequence | MTKHRLLLVD GSSYLYRAFH AMPDLRNGAG EPTGAIYGMV NMMRRTRSEL KADHIACVFD
AKGKTFRDEM YSEYKAHRSP MPEDLVKQIE PIHAMVKALG WPVLMVGGVE ADDVIGTLAC
QATQAGWETI ISTDDKDLAQ LVNSSVTLIN TMTNEKLDIE GVKEKFGVPP ELIVDYLSII
GDAVDNVPGV PKAGPKTANK WLAEFGSLDN LMANADQVKG VVGENLRASL DWLPQAHQLI
TVKTDCDLSP HLPGLDDLHA KSEDAPLLRE LFERYAFKTW LRDVEKQLTS PADKASEVVT
FDLAGSPLTP SERGFDEEKK TRVIVSAPTK NLSQETRDSQ DTIERRYECI VDIVGLEKWL
KKIESSQLTA VDTETTSLDA FAAELVGISL SVKPGEACYI PVAHRNGEAQ LDRDLVLARM
KSWLESATHL KVGQNLKYDS HIFANYGITL KGVVFDTLLE SYVLESHLPH NMDSLAERHL
GMKTIRYEEV CGKGVHQIGF DQVDLKIATD YAAEDADITL RLHLELWPQI QESPGLLYVY
EKVEMPAMRV LGIMERNGIR IDSALLAKQG QQVGKRLLEL EGEIHKLAGQ PFNIQSPKQI
AEILFGQLEL PVIKKTPSGA PSTDEEVLQK LAEDYPLPAR ILDYRSLAKL MSTYIEKLPR
MADPKTGRVH TNFSQATAVT GRLASSDPNL QNIPVRTEEG RRIREAFIPA EGCKLLSADY
SQIELRIMAH IAEDENLLTA FRDGKDVHQA TAAEIFGVPL DDVSSEQRRY AKVINFGLIY
GMSAFGLAGN LGIECSAAQN YIAKYFDRYP GVAQYMERTR LEARENGYVE TVFGRRLWSP
EIKGSNGPRR QGAERAAINA PMQGTAADLI KLAMIAVEDW FEKEQLKTKM LLQVHDELVF
DVPLDEIELL QAKLPNLMCH VAQLKVPLAV SIGIGDNWEE AH
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