| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1425 |
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| Symbol | |
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| ID | 6183525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1221864 |
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| End bp | 1222970 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641671966 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_001798138 |
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| Protein GI | 171464025 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.293584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAATC TGGCTACCGC GCAGAAGCTT GCGCCATTCA ATCTACAACT GCCGGTTCCG
GCATATTTTG ACGCTGACTT GTATCAGCGG GAAATTGATC TACTTTTCAA GCAGGGTCCC
GGCTATATTG GTCACGAACT GATGGTGCCC GAAGTTGGCT CATACCAAAC TTTAAGCGCG
GAAAACAAAG GTCGCATCCT CGTTCGCAAT GAATCTGGTG TAGAACTACT TTCCAATGTA
TGTCGTCATC GCCAAGCACA CATGCTCAAC GGCCGCGGCA AAGCGGACAA CATTGTTTGC
CTACTACATC GCTGGACATA TAACTTGGAT GGCAAATTAT TAGGCGCGCC ACACTTTGAA
AATAAGCCTT GTTTAAATCT TGGCAAGTCC CCTTTGCAAA ACTGGCAAGG CTTGTTATTT
GAAGGTCCAC GTGATGTGTG CGCTGATCTT GCGAAACTCG GCGTTGCCGA TGACCTCAAA
TTTGATGGCT ATGTACTGGA TCATATTGAA GTGCATGATT GCAACTACAA CTGGAAAACA
TTCATTGATG TATATCTCGA GGACTATCAC GTAGTGCCAT TTCATCCAGG CTTAGGTAAG
TTTGTTTCCT GCGAAGATCT TCAATGGGAA TTTGGCGATT GGCATAGCGT ACAAACCGTA
GGCATCCATA AAGATTTAAA GTCGCCAGGG TCGCCAACCT ATCGCAATTG GCATGAGGCA
GTGTTACGAA AGTTTGACGG CAAAGCCCCG CGCCATGGTG CTATCTGGCT AACCTATTAC
CCCAATGTAA TGGTGGAGTG GTACCCAGGA GTGCTCTGCG TATCAACACT TCACCCAATG
GGACCTGGTA AGACTCGCAA CATTGTGGAG TTCTACTATC CCGAAGAGAT TGCTCTTTTT
GAGCGCGAGT TTGTCGAAGC TAAACGAGCC GCCTATATGG AAACTTGCAT CGAAGATGAT
GAAATCGGTG AGTGCATAGA TCAAGGTCGT GCCGCACTCT ATGCACGCGG TATTAATGAA
GTTGGCCCAT ATCAAAGCCC AATGGAAGAC GGCATGCAAC ATTTTCATGA GTGGTATCGC
CGCATCATGA ATTTTGAAGG CACATAA
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| Protein sequence | MTNLATAQKL APFNLQLPVP AYFDADLYQR EIDLLFKQGP GYIGHELMVP EVGSYQTLSA
ENKGRILVRN ESGVELLSNV CRHRQAHMLN GRGKADNIVC LLHRWTYNLD GKLLGAPHFE
NKPCLNLGKS PLQNWQGLLF EGPRDVCADL AKLGVADDLK FDGYVLDHIE VHDCNYNWKT
FIDVYLEDYH VVPFHPGLGK FVSCEDLQWE FGDWHSVQTV GIHKDLKSPG SPTYRNWHEA
VLRKFDGKAP RHGAIWLTYY PNVMVEWYPG VLCVSTLHPM GPGKTRNIVE FYYPEEIALF
EREFVEAKRA AYMETCIEDD EIGECIDQGR AALYARGINE VGPYQSPMED GMQHFHEWYR
RIMNFEGT
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