| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1423 |
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| Symbol | |
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| ID | 6183559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1220566 |
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| End bp | 1221468 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641671964 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_001798136 |
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| Protein GI | 171464023 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.37451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTG TTTTTTCATT TCACGAGTGG GTGACTTCTC ACTCCATACG AACTGAGCAG
ACCTTAGATC GTTTGCTTGA TTCTGCCCAA ACTATTCCCC ATCGTTTGCA TGAAGCAATC
CGCTATGCAG CGCAGGGCGG CGGCAAGCGT ATAAGACCAC TGCTAGTTTA TGCAGCTGGT
CAACTGGGTA ATAAGTCGGA TGTAGTGCCG GTCGAGTTTT TGGATGCGGC TGCTGTGGCG
ATTGAATGTA TTCATGCTTA CTCGCTAGTG CACGATGATT TACCTTGCAT GGATGACGAT
TATCTGCGTC GCGGCCGACC AACAGTTCAC AAGGCTTTTG ATGAAGCAAC AGCGCTTCTG
GTGGGGGATG CGTTGCAAAC TCGCGCTTTT GAGATTCTGG CTAATACAAA TGGCGATGCG
CAGGTGCGCT TAAGAATGAT TTCTACTTTA GCGGCTGCCT CTGGTTCGCG TGGGATGGCC
GGTGGCCAGG CAATTGATTT GGAGAGCGTT GGTAAAAAGC TTGATCTTCA AGGTTTAAAG
CAAATGCATG CTATGAAGAC GGGTGCATTA TTGTCATGCG CTGTAGAGTT AGGTGGAATA
GCCGCCCATC TCAATTTTGC CCAAATGATG CAGCTCCAAA GCTATTCAAA ATCCCTAGGA
TTGGCATTTC AGATTGTGGA TGACGTGCTT GACGCCACTG CCGACAGCCA GACGCTAGGT
AAGACAGCCG GTAAAGATGC TGCCGCCAAT AAGCCGACCT ATGTGACCTT GATGGGTTTA
GACTATGCGC AGAAGCAAGC GAAAGAGCTA CAAGAAGTAG CAATCGCTAG TTTGGATAGT
TTTGGCGCTT CAGCGCAGGC ATTAAAGGAT TTGGCTCTCT TGGTTGTCAA TCGCGGCAAA
TAA
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| Protein sequence | MNSVFSFHEW VTSHSIRTEQ TLDRLLDSAQ TIPHRLHEAI RYAAQGGGKR IRPLLVYAAG
QLGNKSDVVP VEFLDAAAVA IECIHAYSLV HDDLPCMDDD YLRRGRPTVH KAFDEATALL
VGDALQTRAF EILANTNGDA QVRLRMISTL AAASGSRGMA GGQAIDLESV GKKLDLQGLK
QMHAMKTGAL LSCAVELGGI AAHLNFAQMM QLQSYSKSLG LAFQIVDDVL DATADSQTLG
KTAGKDAAAN KPTYVTLMGL DYAQKQAKEL QEVAIASLDS FGASAQALKD LALLVVNRGK
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