| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1419 |
|---|
| Symbol | rpsU |
|---|
| ID | 6183609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010531 |
|---|
| Strand | - |
|---|
| Start bp | 1216392 |
|---|
| End bp | 1216604 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641671960 |
|---|
| Product | 30S ribosomal protein S21 |
|---|
| Protein accession | YP_001798132 |
|---|
| Protein GI | 171464019 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0828] Ribosomal protein S21 |
|---|
| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAG TCCGCCTCCG CGAAAACGAA CCATTTGAAG TGGCATTGCG CCGTTTCAAG
CGCACCATTG AAAAGAATGG CCTTTTGACA GACTTGCGTG CGCGCGAGTT CTACGAAAAG
CCAACGGCTG AGCGTAAGCG TAAGAAGGCT GCAGCTGCTA AGCGCCATTA CAAGCGCATT
CGCAGCCAAA TGTTGCCTAA GAAGCTTTAC TAA
|
|---|
| Protein sequence | MTTVRLRENE PFEVALRRFK RTIEKNGLLT DLRAREFYEK PTAERKRKKA AAAKRHYKRI
RSQMLPKKLY
|
|---|
| |