Gene Pnec_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1410 
Symbol 
ID6183711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1206586 
End bp1207281 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content47% 
IMG OID641671952 
Productnitroreductase 
Protein accessionYP_001798125 
Protein GI171464012 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TAACTGCAGC TGAGGCAATT ACATCGCGCA TGTCTGTGCG AGCATTTACA 
AAAGAGGTCG TTTCAAAAGA AGTCATCCTG AAATTGCTCG AAATATCCGC GCGTGCACCT
TCGGGTACGA ACACCCAGCC ATGGAAAGCT TATGTCGTAG AGGGAGAGGC GCTTGCAGAT
TTATGTGGAA AAGTATGTTC CGCCTATGAC AGTATCGCCG CCAATCCTGA GTTGGCAAAA
GAATATCAAC CAGCATATGA CTACTATCCG ACTAAGTGGT TTAGTCCCTA TATTGATAGA
CGACGTGAAA ATGGTTGGGG CTTATACGGG CTATTGGGGA TTACTAAGGG TGACAAAGAC
AAGATGCATG CACAGCATCG AAAAAACTTT GAGGCATTTG GTGCGCCAGT TTGCATTTTC
TTTACGATTG ACAAAGAGCT TGGCAGGGGC TCCATGCTCG ACTATGGAAT GTTCTTACAG
AACATCATGG TAGCTGCCAG GGGCGAAGGG CTTGATACTT GTCCTCAGGC CGCCTGGAAC
GACTACGCAA AGATCATCTT GCCGCTTATT GATGCAAAAG AGAATGAAAT GCTCGTGTGC
GGTATGGCGC TTGGTTGTGC GGATAAAAGT GCGCCAGTGA ACACATTTCA TACCCCCAGG
GTCGCCGTAG AAAGCTTTGC AACCTGGGTT AAATAA
 
Protein sequence
MKALTAAEAI TSRMSVRAFT KEVVSKEVIL KLLEISARAP SGTNTQPWKA YVVEGEALAD 
LCGKVCSAYD SIAANPELAK EYQPAYDYYP TKWFSPYIDR RRENGWGLYG LLGITKGDKD
KMHAQHRKNF EAFGAPVCIF FTIDKELGRG SMLDYGMFLQ NIMVAARGEG LDTCPQAAWN
DYAKIILPLI DAKENEMLVC GMALGCADKS APVNTFHTPR VAVESFATWV K