Gene Pnec_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1408 
Symbol 
ID6184266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1205813 
End bp1206337 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content42% 
IMG OID641671950 
Producthypothetical protein 
Protein accessionYP_001798123 
Protein GI171464010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGCAGC TCAAACTAAA AGCTATCGAA AACGCTAAAT ATTTGGCACA AGTTGCTGTT 
GAAAGCGCTC AAGAATTAGC TGAAATCAAC CAAGCTGCTG CTCAAGATAC AAGCTCACAA 
TTGTTGGCAA TTAAGGATCC ACAACAATTA GCTAAATTGG CTCAGCCAGA AGCTGCTCAA 
GAAGCTGCTA AGTATGCTGC TGCTTACCAA GCTAAAGTAA ACAAAGTAGT ACGTAACGGC 
AATAAAGAAG TAGCTCAAGT AGTTGACGCT TCTATTGATG ATGCGCGTGC TGATTTGGTT 
AAGTTTGTTA AAGAAGCTAC TAAGACAGCT TCTGCTGGTT CTGAAGCTTT TGTTTCTGCA 
TTCAAAACTG CATTTGAGTC TTCACTCCAA CAGTTCGACC AAGCTCGTGC AACTGCTACT 
GATGCATTTG CTAACTTCGA AAAGAGCGTT GATGCTGCAT TGGCAAACGT TCAAGGTCAA 
TACGCTGTTG CTAAGTTAGC TGCTAAAAGC TGTAAAGCTG CTTAA
 
Protein sequence
MLQLKLKAIE NAKYLAQVAV ESAQELAEIN QAAAQDTSSQ LLAIKDPQQL AKLAQPEAAQ 
EAAKYAAAYQ AKVNKVVRNG NKEVAQVVDA SIDDARADLV KFVKEATKTA SAGSEAFVSA 
FKTAFESSLQ QFDQARATAT DAFANFEKSV DAALANVQGQ YAVAKLAAKS CKAA